RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385073", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA385073 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4233168 4233168 PRJNA385073_P_NODE_39384_length_255_cov_1.692308_g39222_i0 PRJNA385073 39384 255 1.692308 4.3153854 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 62.1 3.85e-5   NTclustered gi|827038732|gb|CP010904.1| 1307763 g39222 i0 100 0.905882352941176 33 0 13 0 111 143 1887855 1887887 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 231 62.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
29664224 29664224 PRJNA385073_P_NODE_50310_length_246_cov_0.890173_g50148_i0 PRJNA385073 50310 246 0.890173 2.18982558 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 49.7 1.32e-4   NR MBP7636531.1 2212473 g50148 i0 95.8 0.292682926829268 24 1 29.3 0 244 173 389 412 MBP7636531.1 [FeFe] hydrogenase H-cluster maturation GTPase HydF [Kiritimatiellia bacterium] diamond 72 49.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;