RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA385073", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA385073 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27075178 27075178 PRJNA385073_P_NODE_41222_length_251_cov_1.550562_g41060_i0 PRJNA385073 41222 251 1.550562 3.89191062 Ignavibacterium album 591197 Bacteria Bacteria 156 7.19e-44   NR WP_014561886.1 591197 g41060 i0 92.8 0.99203187250996006 83 6 99.2 0 249 1 249 331 WP_014561886.1 phage minor head protein [Ignavibacterium album] diamond 249 156 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
27169772 27169772 PRJNA385073_P_NODE_45402_length_249_cov_0.875000_g45240_i0 PRJNA385073 45402 249 0.875 2.17875 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 134 3.75e-36   NR MCW8803608.1 2651163 g45240 i0 77.1 1 83 19 100 0 249 1 191 273 MCW8803608.1 IS110 family transposase [Ignavibacteriaceae bacterium] diamond 249 134 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
27991295 27991295 PRJNA385073_P_NODE_43005_length_250_cov_0.870056_g42843_i0 PRJNA385073 43005 250 0.870056 2.17514 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 132 1.16e-38   NR MBI5809085.1 2049428 g42843 i0 100 0.804 67 0 80.4 0 42 242 1 67 MBI5809085.1 dodecin domain-containing protein [Ignavibacteriales bacterium] diamond 201 132 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
29096397 29096397 PRJNA385073_P_NODE_57548_length_242_cov_0.911243_g57386_i0 PRJNA385073 57548 242 0.911243 2.20520806 Ignavibacteria bacterium 2053306 Bacteria Bacteria 102 3.46e-25   NR MDO8548858.1 2053306 g57386 i0 89.1 1.37603305785124 55 6 68.2 0 237 73 117 171 MDO8548858.1 ferritin [Ignavibacteria bacterium] diamond 333 102 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;