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contig_metadata

15 rows where bioproject = "PRJNA385073", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 15 ✖

tax_clade 1

  • Discoba · 15 ✖

bioproject 1

  • PRJNA385073 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1076055 1076055 PRJNA385073_P_NODE_23521_length_301_cov_1.807018_g23359_i0 PRJNA385073 23521 301 1.807018 5.43912418 Peranema 3287 Euglenozoa other_Eukaryota 154 7.46e-33   NTclustered gi|1803019098|gb|MT007870.1| 56466 g23359 i0 86.577 2.97009966777409 149 9 49 6 138 285 939 1077 Peranema trichophorum strain PtR small subunit ribosomal RNA gene, partial sequence blastn 894 154 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
1680240 1680240 PRJNA385073_P_NODE_10542_length_399_cov_1.536810_g10381_i0 PRJNA385073 10542 399 1.53681 6.1318719 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 453 8.970000000000001e-123   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g10381 i0 98.077 93.8571428571429 260 5 65 0 140 399 4972 5231 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 37449 453 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
5510272 5510272 PRJNA385073_P_NODE_62985_length_226_cov_2.013072_g62823_i0 PRJNA385073 62985 226 2.013072 4.54954272 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 5.79e-28   NR QLA09565.1 3039 g62823 i0 68.9 5.8938053097345096 74 23 98.2 0 222 1 123 196 QLA09565.1 40S small subunit ribosomal protein uS3 [Euglena gracilis] diamond 1332 110 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
6179466 6179466 PRJNA385073_P_NODE_65365_length_198_cov_15.032000_g65203_i0 PRJNA385073 65365 198 15.032 29.76336 Trypanosoma 5690 Euglenozoa other_Eukaryota 300 5.55e-77   NTclustered gi|46091659|dbj|AB175623.1| 169531 g65203 i0 94.416 126.772727272727 197 7 98 4 4 198 5459 5653 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 25101 300 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
6783235 6783235 PRJNA385073_P_NODE_17126_length_336_cov_4.524715_g16965_i0 PRJNA385073 17126 336 4.524715 15.2030424 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 420 7.54e-113   NTclustered gi|1031970241|gb|CP015675.1| 85057 g16965 i0 91.64 113.3125 311 15 90 10 35 336 530185 530493 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI25, partial sequence blastn 38073 420 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
9334614 9334614 PRJNA385073_P_NODE_62048_length_229_cov_3.102564_g61886_i0 PRJNA385073 62048 229 3.102564 7.10487156 Parabodo caudatus 351713 Euglenozoa other_Eukaryota 424 3.76e-114   NTclustered gi|381413267|gb|JF754435.1| 351713 g61886 i0 100 92.1004366812227 229 0 100 0 1 229 300 72 Parabodo caudatus 18S ribosomal RNA gene, partial sequence blastn 21091 424 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
13159965 13159965 PRJNA385073_P_NODE_47831_length_247_cov_1.494253_g47669_i0 PRJNA385073 47831 247 1.494253 3.69080491 Decastava edaphica 1732396 Euglenozoa other_Eukaryota 113 1.01e-20   NTclustered gi|937541987|gb|KP306753.1| 1732396 g47669 i0 78.191 39.7732793522267 188 34 75 7 1 185 15 198 Decastava edaphica strain CCAP 1265/2 18S ribosomal RNA gene, partial sequence blastn 9824 113 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
15708299 15708299 PRJNA385073_P_NODE_17873_length_331_cov_2.666667_g17711_i0 PRJNA385073 17873 331 2.666667 8.82666777 Procryptobia sorokini 351715 Euglenozoa other_Eukaryota 516 9.2e-142   NTclustered gi|197723538|gb|EF681923.2| 351715 g17711 i0 94.864 142.924471299094 331 16 100 1 1 331 93 422 Procryptobia sorokini strain HFCC98 28S ribosomal RNA gene, partial sequence blastn 47308 516 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sorokini
15708330 15708330 PRJNA385073_P_NODE_19693_length_320_cov_4.623482_g19531_i0 PRJNA385073 19693 320 4.623482 14.7951424 Parabodo caudatus 351713 Euglenozoa other_Eukaryota 508 1.48e-139   NTclustered gi|381413267|gb|JF754435.1| 351713 g19531 i0 97.643 76.65625 297 5 93 2 25 320 972 1267 Parabodo caudatus 18S ribosomal RNA gene, partial sequence blastn 24530 508 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
15708378 15708378 PRJNA385073_P_NODE_21773_length_310_cov_2.594937_g21611_i0 PRJNA385073 21773 310 2.594937 8.0443047 Leishmania panamensis 5679 Euglenozoa other_Eukaryota 283 9.43e-72   NTclustered gi|731692577|ref|XM_010699397.1| 5679 g21611 i0 82.428 120.906451612903 313 46 99 6 4 310 253 562 Leishmania panamensis elongation factor 1-alpha partial mRNA blastn 37481 283 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania panamensis
16983214 16983214 PRJNA385073_P_NODE_29214_length_281_cov_1.480769_g29052_i0 PRJNA385073 29214 281 1.480769 4.16096089 Dinema validum 2704078 Euglenozoa other_Eukaryota 520 5.909999999999999e-143   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g29052 i0 100 1.59786476868327 281 0 100 0 1 281 1693 1413 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 449 520 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
18257532 18257532 PRJNA385073_P_NODE_37595_length_259_cov_2.413978_g37433_i0 PRJNA385073 37595 259 2.413978 6.25220302 Liburna glaciale 2493243 Euglenozoa other_Eukaryota 459 1.19e-124   NTclustered gi|1614034780|gb|MK239290.1| 2493243 g37433 i0 98.837 5.53667953667954 258 2 99 1 1 257 258 1 Liburna glaciale isolate UB55 small subunit ribosomal RNA gene, partial sequence blastn 1434 459 1 Eukaryota Discoba   Euglenozoa Euglenida     Liburna Liburna glaciale
25302660 25302660 PRJNA385073_P_NODE_65680_length_196_cov_4.333333_g65518_i0 PRJNA385073 65680 196 4.333333 8.49333268 Trypanosoma 5690 Euglenozoa other_Eukaryota 279 7.14e-71   NTclustered gi|46091659|dbj|AB175623.1| 169531 g65518 i0 92.424 122.821428571429 198 12 100 3 1 196 5457 5653 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 24073 279 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
28149150 28149150 PRJNA385073_P_NODE_13165_length_368_cov_1.566102_g13004_i0 PRJNA385073 13165 368 1.566102 5.76325536 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 53.5 8.14e-6   NR XP_009314629.1 71804 g13004 i0 37.2 0.701086956521739 86 50 69.3 2 3 257 1 83 XP_009314629.1 Smr domain containing protein, partial [Trypanosoma grayi] diamond 258 53.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
31577532 31577532 PRJNA385073_P_NODE_29716_length_280_cov_1.140097_g29554_i0 PRJNA385073 29716 280 1.140097 3.1922716 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 160 2.4699999999999994e-48   NR XP_809534.1 5693 g29554 i0 75.3 4.76785714285714 89 22 95.4 0 268 2 29 117 XP_809534.1 hypothetical protein, conserved [Trypanosoma cruzi] diamond 1335 160 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;