RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA385073", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA385073 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27580656 27580656 PRJNA385073_P_NODE_60984_length_234_cov_2.633540_g60822_i0 PRJNA385073 60984 234 2.63354 6.1624836 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 94.7 3.0900000000000003e-21   NR MCC5877612.1 2715255 g60822 i0 58.4 1.92307692307692 77 32 98.7 0 232 2 143 219 MCC5877612.1 GTPase HflX [Candidatus Sumerlaeia bacterium] diamond 450 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
28496512 28496512 PRJNA385073_P_NODE_63387_length_220_cov_4.959184_g63225_i0 PRJNA385073 63387 220 4.959184 10.9102048 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 105 5.29e-25   NR MEO8376055.1 2107588 g63225 i0 63.9 3.92727272727273 72 26 98.2 0 218 3 205 276 MEO8376055.1 serine/threonine-protein kinase [Candidatus Sumerlaeota bacterium] diamond 864 105 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
28528147 28528147 PRJNA385073_P_NODE_63407_length_220_cov_4.496599_g63245_i0 PRJNA385073 63407 220 4.496599 9.8925178 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 43.5 0.013   NR MCC6545947.1 2107588 g63245 i0 56.3 0.436363636363636 32 14 43.6 0 220 125 200 231 MCC6545947.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 96 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;