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contig_metadata

34 rows where bioproject = "PRJNA385073" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 34 ✖

bioproject 1

  • PRJNA385073 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5509328 5509328 PRJNA385073_P_NODE_21225_length_312_cov_1.288703_g21063_i0 PRJNA385073 21225 312 1.288703 4.02075336 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 289 2.04e-73   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g21063 i0 83.648 262.211538461538 318 40 100 8 1 312 2239525 2239214 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 81810 289 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
5509797 5509797 PRJNA385073_P_NODE_41005_length_251_cov_2.578652_g40843_i0 PRJNA385073 41005 251 2.578652 6.47241652 Patescibacteria group bacterium 2052139 Bacteria Bacteria 394 3.28e-105   NTclustered gi|2556885218|gb|CP129471.1| 2052139 g40843 i0 94.882 219.908366533865 254 10 100 1 1 251 70933 70680 MAG: Patescibacteria group bacterium isolate cMAG.25 chromosome, complete genome blastn 55197 394 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
6783873 6783873 PRJNA385073_P_NODE_45126_length_249_cov_0.875000_g44964_i0 PRJNA385073 45126 249 0.875 2.17875 Candidatus Minusculum obligatum 1948790 Bacteria Bacteria 268 2.06e-67   NTclustered gi|2862534883|gb|CP174360.1| 1948790 g44964 i0 86.345 35.2248995983936 249 30 100 4 1 249 190593 190837 MAG: Patescibacteria group bacterium UBA2103 chromosome, complete genome blastn 8771 268 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Minusculum Candidatus Minusculum obligatum
11884763 11884763 PRJNA385073_P_NODE_39970_length_253_cov_9.472222_g39808_i0 PRJNA385073 39970 253 9.472222 23.96472166 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 292 1.24e-74   NTclustered gi|2814788387|emb|OY762897.2| 2838779 g39808 i0 88.477 241.501976284585 243 27 96 1 3 245 597131 596890 MAG: Candidatus Binatia bacterium isolate 08c4157d-86a7-49cc-8b26-f3076a3ae996 genome assembly, chromosome: 1 blastn 61100 292 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
13829651 13829651 PRJNA385073_P_NODE_30311_length_278_cov_1.502439_g30149_i0 PRJNA385073 30311 278 1.502439 4.17678042 Bacteria 2 Bacteria Bacteria 300 8.280000000000001e-77   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g30149 i0 88.142 123.503597122302 253 28 91 2 1 252 3395685 3395434 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 34334 300 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
16378851 16378851 PRJNA385073_P_NODE_51173_length_245_cov_1.552326_g51011_i0 PRJNA385073 51173 245 1.552326 3.8031987 Bacteria 2 Bacteria Bacteria 102 2.82e-23   NR OGH38318.1 1798620 g51011 i0 85.7 3.42857142857143 56 8 68.6 0 243 76 923 978 OGH38318.1 MAG: excinuclease ABC subunit A [Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_21] diamond 840 103 0.990291262135922 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_38_21
16983654 16983654 PRJNA385073_P_NODE_49634_length_246_cov_0.890173_g49472_i0 PRJNA385073 49634 246 0.890173 2.18982558 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 73.2 2.56e-13   NR HEV7734552.1 2838779 g49472 i0 79.5 0.536585365853659 44 9 53.7 0 132 1 1 44 HEV7734552.1 crotonase/enoyl-CoA hydratase family protein [Candidatus Binatia bacterium] diamond 132 73.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
26726633 26726633 PRJNA385073_P_NODE_62761_length_226_cov_3.692810_g62599_i0 PRJNA385073 62761 226 3.69281 8.3457506 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 50.4 3.42e-5   NR MFA5623348.1 2099670 g62599 i0 41.5 0.86283185840708 65 38 86.3 0 224 30 103 167 MFA5623348.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 195 50.4 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
26885552 26885552 PRJNA385073_P_NODE_54521_length_243_cov_1.941176_g54359_i0 PRJNA385073 54521 243 1.941176 4.71705768 Minisyncoccota bacterium 2053589 Bacteria Bacteria 120 1.54e-32   NR MBP6925883.1 2053589 g54359 i0 75 4.9382716049382704 80 20 98.8 0 3 242 3 82 MBP6925883.1 30S ribosomal protein S7 [Candidatus Paceibacterota bacterium] diamond 1200 120 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27043580 27043580 PRJNA385073_P_NODE_60222_length_237_cov_3.829268_g60060_i0 PRJNA385073 60222 237 3.829268 9.07536516 Parcubacteria group bacterium CG1_ 2026774 Bacteria Bacteria 116 2.15e-29   NR OIO49332.1 1805309 g60060 i0 69.6 1 79 24 100 0 1 237 41 119 OIO49332.1 MAG: phospho-N-acetylmuramoyl-pentapeptide-transferase, partial [Parcubacteria group bacterium CG1_02_42_13] diamond 237 116 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium CG1_02_42_13
27359834 27359834 PRJNA385073_P_NODE_27383_length_286_cov_2.553991_g27221_i0 PRJNA385073 27383 286 2.553991 7.30441426 Minisyncoccota bacterium 2053589 Bacteria Bacteria 70.5 6.32e-12   NR MFA5386774.1 2053589 g27221 i0 61 1.20629370629371 59 20 61.9 1 184 8 89 144 MFA5386774.1 ParB N-terminal domain-containing protein [Candidatus Paceibacterota bacterium] diamond 345 70.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27580637 27580637 PRJNA385073_P_NODE_33704_length_269_cov_1.306122_g33542_i0 PRJNA385073 33704 269 1.306122 3.51346818 Minisyncoccota bacterium 2053589 Bacteria Bacteria 157 3.47e-46   NR MFA5932377.1 2053589 g33542 i0 86.5 1.98513011152416 89 12 99.3 0 269 3 74 162 MFA5932377.1 queuosine precursor transporter [Candidatus Paceibacterota bacterium] diamond 534 157 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27580656 27580656 PRJNA385073_P_NODE_60984_length_234_cov_2.633540_g60822_i0 PRJNA385073 60984 234 2.63354 6.1624836 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 94.7 3.0900000000000003e-21   NR MCC5877612.1 2715255 g60822 i0 58.4 1.92307692307692 77 32 98.7 0 232 2 143 219 MCC5877612.1 GTPase HflX [Candidatus Sumerlaeia bacterium] diamond 450 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
28054248 28054248 PRJNA385073_P_NODE_63925_length_213_cov_5.207143_g63763_i0 PRJNA385073 63925 213 5.207143 11.09121459 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 90.9 7.36e-20   NR MSU73845.1 2030810 g63763 i0 79.6 3.61971830985915 54 11 76.1 0 167 6 4 57 MSU73845.1 hypothetical protein [Candidatus Kaiserbacteria bacterium] diamond 771 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
28243592 28243592 PRJNA385073_P_NODE_55646_length_243_cov_0.905882_g55484_i0 PRJNA385073 55646 243 0.905882 2.20129326 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 89 2.04e-18   NR MDI6809842.1 2212470 g55484 i0 54.7 2.91358024691358 75 34 92.6 0 1 225 457 531 MDI6809842.1 Hsp70 family protein [Candidatus Eiseniibacteriota bacterium] diamond 708 89 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
28464921 28464921 PRJNA385073_P_NODE_27446_length_286_cov_1.948357_g27284_i0 PRJNA385073 27446 286 1.948357 5.57230102 TM7 phylum sp. oral taxon 35 713052 Bacteria Bacteria 157 1.83e-44   NR TWP08441.1 713052 g27284 i0 81.8 1.03846153846154 99 1 86 1 284 39 263 361 TWP08441.1 hypothetical protein EUA76_01625 [TM7 phylum sp. oral taxon 350] diamond 297 157 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 350
28496512 28496512 PRJNA385073_P_NODE_63387_length_220_cov_4.959184_g63225_i0 PRJNA385073 63387 220 4.959184 10.9102048 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 105 5.29e-25   NR MEO8376055.1 2107588 g63225 i0 63.9 3.92727272727273 72 26 98.2 0 218 3 205 276 MEO8376055.1 serine/threonine-protein kinase [Candidatus Sumerlaeota bacterium] diamond 864 105 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
28528147 28528147 PRJNA385073_P_NODE_63407_length_220_cov_4.496599_g63245_i0 PRJNA385073 63407 220 4.496599 9.8925178 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 43.5 0.013   NR MCC6545947.1 2107588 g63245 i0 56.3 0.436363636363636 32 14 43.6 0 220 125 200 231 MCC6545947.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 96 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
29001963 29001963 PRJNA385073_P_NODE_44828_length_249_cov_0.875000_g44666_i0 PRJNA385073 44828 249 0.875 2.17875 candidate division TM6 bacterium Zodletone_IIa 1511133 Bacteria Bacteria 171 1.2799999999999999e-52   NR KHD90191.1 1511133 g44666 i0 100 1.97590361445783 82 0 98.8 0 247 2 46 127 KHD90191.1 hypothetical protein AH06_00860 [candidate division TM6 bacterium Zodletone_IIa] diamond 492 171 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium Zodletone_IIa
29538233 29538233 PRJNA385073_P_NODE_61930_length_230_cov_2.146497_g61768_i0 PRJNA385073 61930 230 2.146497 4.9369431 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 113 1.43e-27   NR HJY83707.1 2838779 g61768 i0 81.7 0.782608695652174 60 11 78.3 0 1 180 239 298 HJY83707.1 group II intron reverse transcriptase/maturase [Candidatus Binatia bacterium] diamond 180 113 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29885789 29885789 PRJNA385073_P_NODE_27471_length_286_cov_1.765258_g27309_i0 PRJNA385073 27471 286 1.765258 5.04863788 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 50.1 1.35e-4   NR MBI4859088.1 2053586 g27309 i0 38.3 0.986013986013986 94 41 96.5 4 286 11 114 192 MBI4859088.1 type II secretion system protein GspG [Candidatus Rifleibacteriota bacterium] diamond 282 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
29980431 29980431 PRJNA385073_P_NODE_31231_length_275_cov_2.623762_g31069_i0 PRJNA385073 31231 275 2.623762 7.2153455 Minisyncoccota bacterium 2053589 Bacteria Bacteria 146 1.95e-39   NR HYD92961.1 2053589 g31069 i0 71.1 2.94545454545455 90 26 98.2 0 2 271 59 148 HYD92961.1 methionine--tRNA ligase [Candidatus Paceibacterota bacterium] diamond 810 146 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30012156 30012156 PRJNA385073_P_NODE_46031_length_248_cov_1.760000_g45869_i0 PRJNA385073 46031 248 1.76 4.3648 Candidatus Gottesmanbacteria bacterium 2282145 Bacteria Bacteria 114 3.47e-27   NR MBI4066453.1 2282145 g45869 i0 67.1 0.991935483870968 82 27 99.2 0 247 2 137 218 MBI4066453.1 excinuclease ABC subunit UvrA [Candidatus Gottesmanbacteria bacterium] diamond 246 114 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium
30233167 30233167 PRJNA385073_P_NODE_44192_length_249_cov_4.653409_g44030_i0 PRJNA385073 44192 249 4.653409 11.58698841 candidate division TM6 bacterium GW2 95901 Bacteria Bacteria 81.3 1.07e-15   NR KKQ49994.1 1619084 g44030 i0 51.3 0.91566265060241 76 36 90.4 1 8 232 158 233 KKQ49994.1 MAG: Serine/threonine-protein phosphatase [candidate division TM6 bacterium GW2011_GWF2_38_10] diamond 228 81.3 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWF2_38_10
30376832 30376832 PRJNA385073_P_NODE_54992_length_243_cov_0.905882_g54830_i0 PRJNA385073 54992 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 58.2 5.25e-8   NR MDZ7617708.1 2052139 g54830 i0 89.7 1.14814814814815 29 3 35.8 0 89 3 1 29 MDZ7617708.1 hypothetical protein [Patescibacteria group bacterium] diamond 279 58.5 0.994871794871795 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30391619 30391619 PRJNA385073_P_NODE_55193_length_243_cov_0.905882_g55031_i0 PRJNA385073 55193 243 0.905882 2.20129326 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 72.4 1.29e-12   NR MDO8659615.1 2762014 g55031 i0 44.7 1.91358024691358 76 42 93.8 0 229 2 360 435 MDO8659615.1 IS1634 family transposase [Candidatus Parcubacteria bacterium] diamond 465 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31134396 31134396 PRJNA385073_P_NODE_62175_length_229_cov_2.166667_g62013_i0 PRJNA385073 62175 229 2.166667 4.96166743 Bacteria 2 Bacteria Bacteria 99 3.31e-24   NR HSI62950.1 2890869 g62013 i0 61.8 2.67248908296943 68 26 89.1 0 25 228 41 108 HSI62950.1 hypothetical protein [Candidatus Saccharimonadia bacterium] diamond 612 99 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
31371005 31371005 PRJNA385073_P_NODE_32936_length_271_cov_1.282828_g32774_i0 PRJNA385073 32936 271 1.282828 3.47646388 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 119 8.160000000000001e-29   NR MFN8643327.1 2838779 g32774 i0 63.4 0.907749077490775 82 30 90.8 0 6 251 686 767 MFN8643327.1 hypothetical protein [Candidatus Binatia bacterium] diamond 246 119 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31497470 31497470 PRJNA385073_P_NODE_42356_length_251_cov_0.865169_g42194_i0 PRJNA385073 42356 251 0.865169 2.17157419 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 79 6.89e-15   NR HEX2230455.1 2838779 g42194 i0 38.1 1.00398406374502 84 50 99.2 2 250 2 332 414 HEX2230455.1 carotenoid oxygenase family protein [Candidatus Binatia bacterium] diamond 252 79 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31893738 31893738 PRJNA385073_P_NODE_37357_length_260_cov_1.465241_g37195_i0 PRJNA385073 37357 260 1.465241 3.8096266 Bacteria 2 Bacteria Bacteria 82.4 5.2e-16   NR OGK98796.1 1802103 g37195 i0 57 9.09230769230769 86 34 96.9 2 7 258 2655 2739 OGK98796.1 MAG: hypothetical protein A3E31_16520, partial [Candidatus Rokubacteria bacterium RIFCSPHIGHO2_12_FULL_73_22] diamond 2364 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium RIFCSPHIGHO2_12_FULL_73_22
32288547 32288547 PRJNA385073_P_NODE_39059_length_256_cov_1.284153_g38897_i0 PRJNA385073 39059 256 1.284153 3.28743168 Patescibacteria group bacterium 2052139 Bacteria Bacteria 47 0.00136   NR MFH0805484.1 2052139 g38897 i0 55 0.46875 40 18 46.9 0 122 3 339 378 MFH0805484.1 NAD-dependent DNA ligase LigA [Patescibacteria group bacterium] diamond 120 47 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32336934 32336934 PRJNA385073_P_NODE_49259_length_246_cov_2.543353_g49097_i0 PRJNA385073 49259 246 2.543353 6.25664838 Pseudomonadati 3379134 Bacteria Bacteria 100 1.06e-22   NR OGC78768.1 1797239 g49097 i0 67.1 2.84146341463415 76 25 92.7 0 230 3 255 330 OGC78768.1 MAG: hypothetical protein A2852_02955 [Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_01_FULL_54_23] diamond 699 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_01_FULL_54_23
32573200 32573200 PRJNA385073_P_NODE_65219_length_200_cov_4.322835_g65057_i0 PRJNA385073 65219 200 4.322835 8.64567 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.5 6.26e-9   NR HEY6019063.1 2053589 g65057 i0 58.5 0.615 41 17 61.5 0 8 130 75 115 HEY6019063.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 123 58.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32604421 32604421 PRJNA385073_P_NODE_61660_length_231_cov_2.556962_g61498_i0 PRJNA385073 61660 231 2.556962 5.90658222 candidate division NPL-UPA2 bacterium 2894204 Bacteria Bacteria 133 9.27e-37   NR MBT9154773.1 2894204 g61498 i0 84.2 1.97402597402597 76 12 98.7 0 3 230 93 168 MBT9154773.1 hypothetical protein [candidate division NPL-UPA2 bacterium] diamond 456 133 1 Bacteria Bacteria candidate phyla             candidate division NPL-UPA2 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;