contig_metadata
22 rows where bioproject = "PRJNA385064" and tax_phylum = "Fusobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3626610 | 3626610 | PRJNA385064_P_NODE_1523_length_382_cov_5.009009_g1398_i0 | PRJNA385064 | 1523 | 382 | 5.009009 | 19.13441438 | Leptotrichia | 32067 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|1227268105|gb|CP016753.1| | 712368 | g1398 | i0 | 99.721 | 188.510471204188 | 358 | 1 | 95 | 0 | 25 | 382 | 593021 | 592664 | Leptotrichia sp. oral taxon 498, complete genome | blastn | 72011 | 662 | 0.990936555891239 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 498 | ||
| 4232493 | 4232493 | PRJNA385064_P_NODE_3324_length_240_cov_2.287958_g3199_i0 | PRJNA385064 | 3324 | 240 | 2.287958 | 5.4910992 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 372 | 1.4599999999999997e-98 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g3199 | i0 | 94.583 | 286.745833333333 | 240 | 13 | 100 | 0 | 1 | 240 | 2248840 | 2249079 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 68819 | 372 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 4232514 | 4232514 | PRJNA385064_P_NODE_8244_length_159_cov_2.318182_g8119_i0 | PRJNA385064 | 8244 | 159 | 2.318182 | 3.68590938 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 283 | 4.29e-72 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g8119 | i0 | 98.742 | 72.0880503144654 | 159 | 2 | 100 | 0 | 1 | 159 | 119077 | 119235 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 11462 | 283 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 8058662 | 8058662 | PRJNA385064_P_NODE_5847_length_176_cov_1.188976_g5722_i0 | PRJNA385064 | 5847 | 176 | 1.188976 | 2.09259776 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 58.4 | 3.19e-4 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g5722 | i0 | 100 | 0.176136363636364 | 31 | 0 | 18 | 0 | 120 | 150 | 88098 | 88068 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 31 | 58.4 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 10609168 | 10609168 | PRJNA385064_P_NODE_5109_length_189_cov_2.385714_g4984_i0 | PRJNA385064 | 5109 | 189 | 2.385714 | 4.50899946 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 316 | 5.21e-82 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g4984 | i0 | 96.825 | 14.4814814814815 | 189 | 6 | 100 | 0 | 1 | 189 | 51802 | 51990 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 2737 | 316 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 10609178 | 10609178 | PRJNA385064_P_NODE_669_length_621_cov_21.554196_g557_i0 | PRJNA385064 | 669 | 621 | 21.554196 | 133.85155716 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 1136 | 0 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g557 | i0 | 99.678 | 467.375201288245 | 621 | 2 | 100 | 0 | 1 | 621 | 1756023 | 1755403 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 290240 | 1136 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 11279085 | 11279085 | PRJNA385064_P_NODE_4909_length_193_cov_2.104167_g4784_i0 | PRJNA385064 | 4909 | 193 | 2.104167 | 4.06104231 | Cetobacterium | 180162 | Bacteria | Bacteria | 351 | 1.46e-92 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g4784 | i0 | 99.485 | 523.476683937824 | 194 | 0 | 100 | 1 | 1 | 193 | 278496 | 278689 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 101031 | 351 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 12554542 | 12554542 | PRJNA385064_P_NODE_670_length_621_cov_14.954545_g558_i0 | PRJNA385064 | 670 | 621 | 14.954545 | 92.86772445 | Leptotrichia | 32067 | Bacteria | Bacteria | 1142 | 0 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g558 | i0 | 99.839 | 487.792270531401 | 621 | 1 | 100 | 0 | 1 | 621 | 2583 | 1963 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 302919 | 1142 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 13159103 | 13159103 | PRJNA385064_P_NODE_6851_length_166_cov_0.871795_g6726_i0 | PRJNA385064 | 6851 | 166 | 0.871795 | 1.4471797 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g6726 | i0 | 100 | 1 | 166 | 0 | 100 | 0 | 1 | 166 | 656351 | 656186 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 166 | 307 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 15708113 | 15708113 | PRJNA385064_P_NODE_53_length_1928_cov_29.687600_g35_i0 | PRJNA385064 | 53 | 1928 | 29.6876 | 572.376928 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 3424 | 0 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g35 | i0 | 98.855 | 469.69346473029 | 1922 | 19 | 99 | 3 | 2 | 1922 | 2288269 | 2290188 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 905569 | 3424 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 16378378 | 16378378 | PRJNA385064_P_NODE_3853_length_221_cov_5.034884_g3728_i0 | PRJNA385064 | 3853 | 221 | 5.034884 | 11.12709364 | Fusobacterium | 848 | Bacteria | Bacteria | 409 | 1.0100000000000001e-109 | NTclustered | gi|2269773925|gb|CP100429.1| | 76857 | g3728 | i0 | 100 | 470.085972850679 | 221 | 0 | 100 | 0 | 1 | 221 | 1932731 | 1932951 | Fusobacterium polymorphum strain SSMR1 chromosome, complete genome | blastn | 103889 | 409 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 16982748 | 16982748 | PRJNA385064_P_NODE_54_length_1926_cov_23.867342_g35_i1 | PRJNA385064 | 54 | 1926 | 23.867342 | 459.68500692 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 3013 | 0 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g35 | i1 | 95.018 | 484.38785046729 | 1927 | 81 | 99 | 13 | 7 | 1925 | 2299309 | 2297390 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 932931 | 3013 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 17653476 | 17653476 | PRJNA385064_P_NODE_2554_length_281_cov_2.310345_g2429_i0 | PRJNA385064 | 2554 | 281 | 2.310345 | 6.49206945 | Fusobacterium | 848 | Bacteria | Bacteria | 514 | 2.75e-141 | NTclustered | gi|2706074160|gb|CP077112.1| | 76857 | g2429 | i0 | 99.644 | 471.092526690391 | 281 | 1 | 100 | 0 | 1 | 281 | 1884064 | 1884344 | Fusobacterium polymorphum strain KCOM1272 chromosome, complete genome | blastn | 132377 | 514 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 18927402 | 18927402 | PRJNA385064_P_NODE_1695_length_357_cov_12.074675_g1570_i0 | PRJNA385064 | 1695 | 357 | 12.074675 | 43.10658975 | Leptotrichia | 32067 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g1570 | i0 | 99.72 | 201.59943977591 | 357 | 1 | 100 | 0 | 1 | 357 | 18 | 374 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 71971 | 654 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 18927404 | 18927404 | PRJNA385064_P_NODE_2635_length_275_cov_5.115044_g2510_i0 | PRJNA385064 | 2635 | 275 | 5.115044 | 14.066371 | Fusobacterium | 848 | Bacteria | Bacteria | 508 | 1.2499999999999999e-139 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g2510 | i0 | 100 | 470.992727272727 | 275 | 0 | 100 | 0 | 1 | 275 | 106871 | 106597 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 129523 | 508 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 19531235 | 19531235 | PRJNA385064_P_NODE_8076_length_161_cov_0.910714_g7951_i0 | PRJNA385064 | 8076 | 161 | 0.910714 | 1.46624954 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g7951 | i0 | 100 | 10.9565217391304 | 161 | 0 | 100 | 0 | 1 | 161 | 1389108 | 1389268 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 1764 | 298 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 21477565 | 21477565 | PRJNA385064_P_NODE_2537_length_282_cov_3.733906_g2412_i0 | PRJNA385064 | 2537 | 282 | 3.733906 | 10.52961492 | Fusobacterium | 848 | Bacteria | Bacteria | 442 | 1.3199999999999993e-119 | NTclustered | gi|2704957570|gb|CP077164.1| | 851 | g2412 | i0 | 96.283 | 455.315602836879 | 269 | 10 | 95 | 0 | 14 | 282 | 127623 | 127355 | Fusobacterium nucleatum strain SB049 chromosome, complete genome | blastn | 128399 | 442 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 22081806 | 22081806 | PRJNA385064_P_NODE_3938_length_218_cov_2.680473_g3813_i0 | PRJNA385064 | 3938 | 218 | 2.680473 | 5.84343114 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 398 | 2.1499999999999996e-106 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g3813 | i0 | 99.541 | 351.04128440367 | 218 | 1 | 100 | 0 | 1 | 218 | 53587 | 53804 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 76527 | 398 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 24027632 | 24027632 | PRJNA385064_P_NODE_2159_length_310_cov_3.145594_g2034_i0 | PRJNA385064 | 2159 | 310 | 3.145594 | 9.7513414 | Fusobacterium | 848 | Bacteria | Bacteria | 568 | 2.3299999999999995e-157 | NTclustered | gi|2446175567|gb|CP117964.1| | 851 | g2034 | i0 | 99.677 | 490.538709677419 | 310 | 1 | 100 | 0 | 1 | 310 | 2087700 | 2087391 | Fusobacterium nucleatum strain 2/1/50A chromosome, complete genome | blastn | 152067 | 568 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 24027638 | 24027638 | PRJNA385064_P_NODE_3419_length_236_cov_5.834225_g3294_i0 | PRJNA385064 | 3419 | 236 | 5.834225 | 13.768771 | Fusobacterium | 848 | Bacteria | Bacteria | 435 | 1.8e-117 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g3294 | i0 | 100 | 480.03813559322 | 235 | 0 | 99 | 0 | 2 | 236 | 107854 | 107620 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 113289 | 435 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 24631748 | 24631748 | PRJNA385064_P_NODE_1020_length_486_cov_18.432494_g896_i0 | PRJNA385064 | 1020 | 486 | 18.432494 | 89.58192084 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 765 | 0 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g896 | i0 | 95.062 | 378.051440329218 | 486 | 24 | 100 | 0 | 1 | 486 | 222083 | 222568 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 183733 | 765 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 27833204 | 27833204 | PRJNA385064_P_NODE_5884_length_175_cov_1.619048_g5759_i0 | PRJNA385064 | 5884 | 175 | 1.619048 | 2.833334 | Leptotrichia sp. oral taxon 417 | 712365 | Bacteria | Bacteria | 110 | 1.5500000000000002e-26 | NR | WP_178938102.1 | 712365 | g5759 | i0 | 96.6 | 0.994285714285714 | 58 | 2 | 99.4 | 0 | 174 | 1 | 735 | 792 | WP_178938102.1 autotransporter-associated N-terminal domain-containing protein [Leptotrichia sp. oral taxon 417] | diamond | 174 | 110 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 417 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;