RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA385064", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA385064 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4232488 4232488 PRJNA385064_P_NODE_1864_length_339_cov_2.903448_g1739_i0 PRJNA385064 1864 339 2.903448 9.84268872 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 243 1.77e-59   NTclustered gi|2874253741|emb|OY969584.1| 1672391 g1739 i0 81.973 104.979351032448 294 45 85 6 51 338 1350352 1350061 MAG: uncultured Chloroflexia bacterium isolate MFD01299.bin.c.4 genome assembly, chromosome: 1 blastn 35588 243 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
27106612 27106612 PRJNA385064_P_NODE_4882_length_194_cov_1.075862_g4757_i0 PRJNA385064 4882 194 1.075862 2.08717228 Chloroflexota bacterium 2026724 Bacteria Bacteria 41.6 0.0491   NR RIK53850.1 2026724 g4757 i0 34.9 0.974226804123711 63 38 92.8 2 13 192 180 242 RIK53850.1 MAG: hypothetical protein DCC59_05930 [Chloroflexota bacterium] diamond 189 41.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;