RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA384462" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA384462 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28671216 28671216 PRJNA384462_S_NODE_9647_length_186_cov_1.116788_g9531_i0 PRJNA384462 9647 186 1.116788 2.07722568 Thermoplasmatota 2283796 Archaea Archaea 42.4 0.0211   NR DAC54348.1 2163009 g9531 i0 47.9 5.82258064516129 48 25 77.4 0 158 15 1 48 DAC54348.1 MAG TPA: 50S ribosomal protein L32e [Candidatus Poseidoniales archaeon] diamond 1083 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32083561 32083561 PRJNA384462_S_NODE_13938_length_164_cov_1.330435_g13822_i0 PRJNA384462 13938 164 1.330435 2.1819134 Archaea 2157 Archaea Archaea 62 2.04e-9   NR MFL2951787.1 2670411 g13822 i0 56 2.72560975609756 50 22 91.5 0 160 11 2599 2648 MFL2951787.1 putative Ig domain-containing protein [Candidatus Thalassarchaeaceae archaeon] diamond 447 62 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;