RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA384462" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30391596 30391596 PRJNA384462_S_NODE_9213_length_189_cov_2.871429_g9097_i0 PRJNA384462 9213 189 2.871429 5.42700081 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 82.4 3.73e-19   NR MES1917015.1 1215613 g9097 i0 72.9 2.28571428571429 48 13 76.2 0 3 146 9 56 MES1917015.1 ribosomal 40S subunit protein S29B [Cercozoa sp. M6MM] diamond 432 82.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31908477 31908477 PRJNA384462_S_NODE_8397_length_196_cov_1.387755_g8281_i0 PRJNA384462 8397 196 1.387755 2.7199998 Lotharella oceanica 641309 SAR_Eukaryotes SAR_Eukaryotes 65.1 2.82e-12   NR AIB09582.1 641309 g8281 i0 59.6 0.795918367346939 52 21 79.6 0 3 158 3 54 AIB09582.1 hypothetical protein M951_chr1100 [Lotharella oceanica] diamond 156 65.1 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella oceanica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;