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contig_metadata

15 rows where bioproject = "PRJNA384462", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 15 ✖

tax_kingdom 1

  • Metazoa · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2956016 2956016 PRJNA384462_S_NODE_363_length_771_cov_8.019391_g290_i0 PRJNA384462 363 771 8.019391 61.82950461 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 305 3.34e-93   NR MCP9264969.1 6287 g290 i0 69.9 10.4902723735409 206 62 80.2 0 13 630 801 1006 MCP9264969.1 60S ribosomal protein L10 [Dirofilaria immitis] diamond 8088 305 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
5509043 5509043 PRJNA384462_S_NODE_6185_length_220_cov_1.479532_g6069_i0 PRJNA384462 6185 220 1.479532 3.2549704 Pristionchus microcercus 3308705 Nematoda Nematoda 137 5.23e-28   NTclustered gi|675118993|gb|KJ877376.1| 3308705 g6069 i0 80.328 19.0590909090909 183 34 83 2 38 219 416 235 Paroigolaimella micrura large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 4193 137 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus microcercus
8058632 8058632 PRJNA384462_S_NODE_5407_length_232_cov_2.491803_g5291_i0 PRJNA384462 5407 232 2.491803 5.78098296 Strongyloides papillosus 174720 Nematoda Nematoda 243 1.1500000000000001e-59   NTclustered gi|687022644|emb|LM525558.1| 174720 g5291 i0 86.818 64.6336206896552 220 25 94 4 15 232 232637 232420 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000004 blastn 14995 243 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
10609129 10609129 PRJNA384462_S_NODE_3929_length_266_cov_2.714286_g3813_i0 PRJNA384462 3929 266 2.714286 7.22000076 Auanema freiburgensis 1963013 Nematoda Nematoda 52.8 0.024   NTclustered gi|1527173533|gb|MH124555.1| 1963013 g3813 i0 100 0.105263157894737 28 0 11 0 28 55 12755 12728 Auanema freiburgensis strain APS7 UNC-22 (unc-22) mRNA, partial cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema freiburgensis
11884003 11884003 PRJNA384462_S_NODE_2690_length_316_cov_7.063670_g2574_i0 PRJNA384462 2690 316 7.06367 22.3211972 Meloidogyne enterolobii 390850 Nematoda Nematoda 62.8 7.85e-9   NR CAD2164178.1 390850 g2574 i0 40.4 3.66455696202532 94 52 85.4 2 292 23 4 97 CAD2164178.1 unnamed protein product [Meloidogyne enterolobii] diamond 1158 62.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
20806914 20806914 PRJNA384462_S_NODE_15257_length_161_cov_1.357143_g15141_i0 PRJNA384462 15257 161 1.357143 2.18500023 Strongyloides papillosus 174720 Nematoda Nematoda 56.5 0.001   NTclustered gi|690018538|emb|LM525776.1| 174720 g15141 i0 82.54 0.565217391304348 63 11 39 0 99 161 56383 56445 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000163 blastn 91 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
22081762 22081762 PRJNA384462_S_NODE_1438_length_435_cov_2.090674_g1322_i0 PRJNA384462 1438 435 2.090674 9.0944319 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 164 8.969999999999999e-47   NR KRY31199.1 6334 g1322 i0 73.1 201.731034482759 119 31 82.1 1 3 359 196 313 KRY31199.1 histone H3 [Trichinella spiralis] diamond 87753 165 0.993939393939394 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
22081800 22081800 PRJNA384462_S_NODE_978_length_521_cov_2.368644_g864_i0 PRJNA384462 978 521 2.368644 12.34063524 Trichinella spiralis 6334 Nematoda Nematoda 54.7 0.014   NTclustered gi|339237868|ref|XM_003380441.1| 6334 g864 i0 94.444 0.0690978886756238 36 0 7 2 175 209 1195 1161 Trichinella spiralis conserved hypothetical protein (Tsp_06171) mRNA, complete cds blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
23357408 23357408 PRJNA384462_S_NODE_7279_length_207_cov_1.455696_g7163_i0 PRJNA384462 7279 207 1.455696 3.01329072 Caenorhabditis remanei 31234 Nematoda Nematoda 104 4.93e-18   NTclustered gi|2445365113|ref|XM_003113331.2| 31234 g7163 i0 79.221 27.8164251207729 154 29 73 3 45 196 597 445 Caenorhabditis remanei uncharacterized protein (GCK72_009749), partial mRNA blastn 5758 104 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
26870916 26870916 PRJNA384462_S_NODE_3901_length_267_cov_1.844037_g3785_i0 PRJNA384462 3901 267 1.844037 4.92357879 Rhabditida 6236 Nematoda Nematoda 71.6 1.59e-12   NR KAK6060278.1 27828 g3785 i0 67.9 2.51685393258427 53 16 59.6 1 39 197 1 52 KAK6060278.1 ribosomal L29e protein [Cooperia oncophora] diamond 672 72 0.994444444444444 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
26933861 26933861 PRJNA384462_S_NODE_1502_length_425_cov_3.034574_g1386_i0 PRJNA384462 1502 425 3.034574 12.8969395 Trichostrongylidae 6315 Nematoda Nematoda 64.3 3.76e-9   NR KAK6022555.1 6317 g1386 i0 69.6 1.29176470588235 46 13 32.5 1 425 288 179 223 KAK6022555.1 V-type ATPase, D subunit [Ostertagia ostertagi] diamond 549 64.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
27359823 27359823 PRJNA384462_S_NODE_2303_length_343_cov_3.629252_g2187_i0 PRJNA384462 2303 343 3.629252 12.44833436 Mesorhabditis spiculigera 96644 Nematoda Nematoda 86.3 5.84e-17   NR CAJ0584621.1 96644 g2187 i0 67.9 1.4868804664723 53 17 46.4 0 7 165 414 466 CAJ0584621.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 510 86.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
28923547 28923547 PRJNA384462_S_NODE_9928_length_184_cov_1.133333_g9812_i0 PRJNA384462 9928 184 1.133333 2.08533272 Heterodera 34509 Nematoda Nematoda 53.9 1.86e-6   NR KAL3068977.1 97005 g9812 i0 46.7 5.65760869565217 60 30 94.6 1 176 3 466 525 KAL3068977.1 hypothetical protein niasHS_015692 [Heterodera schachtii] diamond 1041 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii
32383070 32383070 PRJNA384462_S_NODE_15699_length_159_cov_2.290909_g15583_i0 PRJNA384462 15699 159 2.290909 3.64254531 Aphelenchoides besseyi 269767 Nematoda Nematoda 67.8 1.42e-11   NR KAI6215557.1 269767 g15583 i0 56.3 1.81132075471698 48 21 90.6 0 2 145 291 338 KAI6215557.1 Fructose-bisphosphatase [Aphelenchoides besseyi] diamond 288 67.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
32730411 32730411 PRJNA384462_S_NODE_10860_length_178_cov_1.550388_g10744_i0 PRJNA384462 10860 178 1.550388 2.75969064 Pristionchus fissidentatus 1538716 Nematoda Nematoda 45.1 0.00162   NR GMT09317.1 1538716 g10744 i0 53.1 0.539325842696629 32 15 53.9 0 26 121 117 148 GMT09317.1 hypothetical protein PFISCL1PPCAC_614, partial [Pristionchus fissidentatus] diamond 96 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;