RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA384462", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30976869 30976869 PRJNA384462_S_NODE_3454_length_281_cov_1.318966_g3338_i0 PRJNA384462 3454 281 1.318966 3.70629446 Thraustochytrida 2699528 SAR_Eukaryotes SAR_Eukaryotes 100 1.39e-22   NR ETO14471.1 46433 g3338 i0 63.8 2.1779359430605 69 25 73.7 0 270 64 378 446 ETO14471.1 hypothetical protein RFI_22900 [Reticulomyxa filosa] diamond 612 100 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31750165 31750165 PRJNA384462_S_NODE_3397_length_284_cov_0.842553_g3281_i0 PRJNA384462 3397 284 0.842553 2.39285052 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 62.4 4.85e-9   NR ETO30602.1 46433 g3281 i0 50.8 0.644366197183099 61 30 64.4 0 237 55 215 275 ETO30602.1 hypothetical protein RFI_06517 [Reticulomyxa filosa] diamond 183 62.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;