RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA384462", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA384462 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405330 405330 PRJNA384462_S_NODE_16321_length_151_cov_2.264706_g16205_i0 PRJNA384462 16321 151 2.264706 3.41970606 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 65.8 1.58e-6   NTclustered gi|2794975353|ref|XM_067871175.1| 2049356 g16205 i0 95.238 24.0132450331126 42 1 27 1 87 127 5611 5570 Monocercomonoides exilis uncharacterized protein (MONOS_18181), partial mRNA blastn 3626 65.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
6782998 6782998 PRJNA384462_S_NODE_12326_length_169_cov_2.541667_g12210_i0 PRJNA384462 12326 169 2.541667 4.29541723 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 3.03e-4   NTclustered gi|2794953232|ref|XM_067878233.1| 2049356 g12210 i0 100 2.24260355029586 31 0 18 0 136 166 527 497 Monocercomonoides exilis uncharacterized protein (MONOS_7873), partial mRNA blastn 379 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
27660873 27660873 PRJNA384462_S_NODE_4284_length_256_cov_2.314010_g4168_i0 PRJNA384462 4284 256 2.31401 5.9238656 root 1 Root_unresolved Root_unresolved 105 2.5e-27   NR KAA6379614.1 222440 g4168 i0 59.3 3.73828125 81 33 94.9 0 251 9 9 89 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 957 105 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29569770 29569770 PRJNA384462_S_NODE_10390_length_181_cov_1.159091_g10274_i0 PRJNA384462 10390 181 1.159091 2.09795471 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 85.9 3.27e-18   NR KAJ4459298.1 342808 g10274 i0 71.4 0.92817679558011 56 16 92.8 0 168 1 195 250 KAJ4459298.1 putative Cathepsin B [Paratrimastix pyriformis] diamond 168 85.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;