RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA384462", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA384462 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32541566 32541566 PRJNA384462_S_NODE_11539_length_174_cov_1.544000_g11423_i0 PRJNA384462 11539 174 1.544 2.68656 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 70.1 3.18e-12   NR MEO0236691.1 2052148 g11423 i0 62.1 1 58 21 98.3 1 173 3 389 446 MEO0236691.1 major capsid protein [candidate division WOR-3 bacterium] diamond 174 70.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32667260 32667260 PRJNA384462_S_NODE_6760_length_213_cov_1.250000_g6644_i0 PRJNA384462 6760 213 1.25 2.6625 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 65.1 3.32e-10   NR MEO0236691.1 2052148 g6644 i0 46.2 1.28169014084507 91 26 100 3 213 1 261 348 MEO0236691.1 major capsid protein [candidate division WOR-3 bacterium] diamond 273 65.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32810104 32810104 PRJNA384462_S_NODE_4820_length_244_cov_1.584615_g4704_i0 PRJNA384462 4820 244 1.584615 3.8664606 root 1 Root_unresolved Root_unresolved 87.4 1.93e-18   NR MEJ2306882.1 2052148 g4704 i0 50.6 4.94262295081967 81 39 98.4 1 240 1 196 276 MEJ2306882.1 carbamoyl phosphate synthase large subunit [candidate division WOR-3 bacterium] diamond 1206 87.8 0.995444191343964 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;