RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA384462", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA384462 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28639722 28639722 PRJNA384462_S_NODE_2187_length_353_cov_1.822368_g2071_i0 PRJNA384462 2187 353 1.822368 6.43295904 Bacillati 1783272 Bacteria Bacteria 122 1.0699999999999999e-31   NR UCC41372.1 2052149 g2071 i0 68.8 7.91218130311615 77 24 65.4 0 18 248 177 253 UCC41372.1 MAG: DUF1295 domain-containing protein [Candidatus Aminicenantes bacterium] diamond 2793 122 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30250285 30250285 PRJNA384462_S_NODE_8792_length_193_cov_0.909722_g8676_i0 PRJNA384462 8792 193 0.909722 1.75576346 Pseudomonadati 3379134 Bacteria Bacteria 42.7 0.0195   NR HNX98378.1 2052149 g8676 i0 40.9 1.36787564766839 44 25 66.8 1 25 153 418 461 HNX98378.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 264 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;