RNAquarium Metadata Server
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contig_metadata

18 rows where bioproject = "PRJNA383995" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA383995 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405293 405293 PRJNA383995_P_NODE_5821_length_262_cov_0.957746_g5722_i0 PRJNA383995 5821 262 0.957746 2.50929452 Tequintavirus SP3 2733991 Viruses Viruses 479 9.249999999999999e-131   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g5722 i0 99.618 92.4083969465649 262 1 100 0 1 262 90628 90889 Salmonella phage SP3, partial genome blastn 24211 479 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
405302 405302 PRJNA383995_P_NODE_9941_length_207_cov_1.291139_g9842_i0 PRJNA383995 9941 207 1.291139 2.67265773 Salmonella phage SP1a 2109652 Viruses Viruses 383 5.65e-102   NTclustered gi|1251987296|gb|MF774690.1| 2109652 g9842 i0 100 121.990338164251 207 0 100 0 1 207 1400 1194 Salmonella phage SP1a clone contig.00004 genomic sequence, sequence blastn 25252 383 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Salmonella phage SP1a
1680112 1680112 PRJNA383995_P_NODE_22_length_2374_cov_5.199570_g15_i0 PRJNA383995 22 2374 5.19957 123.4377918 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2676 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g15 i0 93.775 0.868997472620051 1783 106 87 5 7 1787 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 2063 2676 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
1680113 1680113 PRJNA383995_P_NODE_262_length_1018_cov_8.909185_g3_i4 PRJNA383995 262 1018 8.909185 90.6955033 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 691 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3 i4 94.432 0.546168958742633 449 25 55 0 385 833 2100 2548 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 556 691 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
1680119 1680119 PRJNA383995_P_NODE_502_length_773_cov_4.640884_g427_i0 PRJNA383995 502 773 4.640884 35.87403332 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1099 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g427 i0 92.238 1 773 60 100 0 1 773 6960 6188 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 773 1099 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
1680127 1680127 PRJNA383995_P_NODE_8302_length_224_cov_1.165714_g8203_i0 PRJNA383995 8302 224 1.165714 2.61119936 Tequintavirus SP3 2733991 Viruses Viruses 409 1.03e-109   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g8203 i0 100 99.1964285714286 221 0 99 0 4 224 19950 19730 Salmonella phage SP3, partial genome blastn 22220 409 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
2351201 2351201 PRJNA383995_P_NODE_5242_length_275_cov_0.783186_g5143_i0 PRJNA383995 5242 275 0.783186 2.1537615 Tequintavirus 187218 Viruses Viruses 470 5.89e-128   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g5143 i0 97.455 101.021818181818 275 7 100 0 1 275 18526 18252 Salmonella phage SP3, partial genome blastn 27781 470 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
4232376 4232376 PRJNA383995_P_NODE_10984_length_198_cov_1.026846_g10885_i0 PRJNA383995 10984 198 1.026846 2.03315508 Caudoviricetes sp. 2832643 Viruses Viruses 272 1.21e-68   NTclustered gi|2914935757|gb|OR221655.1| 2832643 g10885 i0 91.457 3.01010101010101 199 15 100 2 1 198 15025 14828 MAG: Caudoviricetes sp. isolate MSP1392 genomic sequence blastn 596 272 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
4232402 4232402 PRJNA383995_P_NODE_4_length_3753_cov_6.712743_g3_i0 PRJNA383995 4 3753 6.712743 251.92924479 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1228 0   NR WKU61618.1 3063761 g3 i0 57.6 1.01438848920863 1269 517 99.8 2 6 3752 586 1853 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 3807 1228 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
7453780 7453780 PRJNA383995_P_NODE_12266_length_187_cov_4.014493_g12167_i0 PRJNA383995 12266 187 4.014493 7.50710191 root 1 Root_unresolved Root_unresolved 337 3.95e-88   NTclustered gi|2620236085|gb|OR777220.1| 10515 g12167 i0 100 97.3262032085562 182 0 97 0 1 182 15042 15223 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 18200 337 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8058563 8058563 PRJNA383995_P_NODE_16747_length_165_cov_0.879310_g16648_i0 PRJNA383995 16747 165 0.87931 1.4508615 Tequintavirus SP3 2733991 Viruses Viruses 305 9.59e-79   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g16648 i0 100 55.1272727272727 165 0 100 0 1 165 3408 3244 Salmonella phage SP3, partial genome blastn 9096 305 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
11883929 11883929 PRJNA383995_P_NODE_10_length_2887_cov_8.181818_g3_i1 PRJNA383995 10 2887 8.181818 236.20908566 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1112 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3 i1 98.119 0.585382750259785 638 12 59 0 2086 2723 639 2 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 1690 1112 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
13158970 13158970 PRJNA383995_P_NODE_11_length_2887_cov_7.657153_g3_i2 PRJNA383995 11 2887 7.657153 221.06200711 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1079 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g3 i2 97.179 0.585382750259785 638 18 59 0 2086 2723 639 2 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 1690 1079 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
13159001 13159001 PRJNA383995_P_NODE_18391_length_162_cov_0.902655_g18292_i0 PRJNA383995 18391 162 0.902655 1.4623011 Shewanella phage FishSpeaker 2985553 Viruses Viruses 244 2.07e-60   NTclustered gi|2316690595|gb|OP589283.1| 2985553 g18292 i0 93.827 1 162 10 100 0 1 162 33343 33182 Shewanella phage FishSpeaker, complete genome blastn 162 244 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Shewanella phage FishSpeaker
13829266 13829266 PRJNA383995_P_NODE_15231_length_167_cov_2.932203_g15132_i0 PRJNA383995 15231 167 2.932203 4.89677901 root 1 Root_unresolved Root_unresolved 309 7.53e-80   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g15132 i0 100 100 167 0 100 0 1 167 18469 18303 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 16700 309 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15707990 15707990 PRJNA383995_P_NODE_13_length_2638_cov_4.830823_g3_i3 PRJNA383995 13 2638 4.830823 127.43711074 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 780 6.83e-254   NR AVM87439.1 3063761 g3 i3 45.4 1.07012888551933 941 400 99.8 10 2636 3 586 1475 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 2823 780 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
17653364 17653364 PRJNA383995_P_NODE_11754_length_192_cov_1.055944_g11655_i0 PRJNA383995 11754 192 1.055944 2.02741248 Tequintavirus 187218 Viruses Viruses 339 1.13e-88   NTclustered gi|1779416030|emb|LR597659.1| 2742946 g11655 i0 98.438 99.328125 192 3 100 0 1 192 70576 70767 Escherichia phage T5_ev212 genome assembly, chromosome: 1 blastn 19071 339 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Escherichia phage T5_ev212
23357348 23357348 PRJNA383995_P_NODE_9919_length_207_cov_1.613924_g9820_i0 PRJNA383995 9919 207 1.613924 3.34082268 Caudoviricetes sp. 2832643 Viruses Viruses 335 1.6099999999999997e-87   NTclustered gi|2914885844|gb|OR222395.1| 2832643 g9820 i0 97.449 1.80193236714976 196 5 95 0 1 196 26484 26289 MAG: Caudoviricetes sp. isolate MSP1008 genomic sequence blastn 373 335 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;