contig_metadata
20 rows where bioproject = "PRJNA383995" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1680108 | 1680108 | PRJNA383995_P_NODE_18222_length_162_cov_0.902655_g18123_i0 | PRJNA383995 | 18222 | 162 | 0.902655 | 1.4623011 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|1714026535|gb|CP031277.1| | 1290 | g18123 | i0 | 100 | 27.3827160493827 | 162 | 0 | 100 | 0 | 1 | 162 | 99897 | 99736 | Staphylococcus hominis strain 19A chromosome, complete genome | blastn | 4436 | 300 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 6178771 | 6178771 | PRJNA383995_P_NODE_15485_length_167_cov_0.864407_g15386_i0 | PRJNA383995 | 15485 | 167 | 0.864407 | 1.44355969 | Streptococcus | 1301 | Bacteria | Bacteria | 254 | 3.58e-63 | NTclustered | gi|1247204361|gb|CP023507.1| | 1303 | g15386 | i0 | 94.012 | 99.7664670658683 | 167 | 10 | 100 | 0 | 1 | 167 | 1751822 | 1751656 | Streptococcus oralis strain FDAARGOS_367 chromosome, complete genome | blastn | 16661 | 254 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 6782968 | 6782968 | PRJNA383995_P_NODE_17706_length_163_cov_0.894737_g17607_i0 | PRJNA383995 | 17706 | 163 | 0.894737 | 1.45842131 | Streptococcus thermophilus | 1308 | Bacteria | Bacteria | 112 | 5.08e-27 | NR | TKW62483.1 | 1308 | g17607 | i0 | 100 | 1.98773006134969 | 54 | 0 | 99.4 | 0 | 1 | 162 | 550 | 603 | TKW62483.1 MAG: hypothetical protein DI612_08705, partial [Streptococcus thermophilus] | diamond | 324 | 112 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 8728460 | 8728460 | PRJNA383995_P_NODE_1627_length_464_cov_1.563855_g1528_i0 | PRJNA383995 | 1627 | 464 | 1.563855 | 7.2562872 | Streptococcus | 1301 | Bacteria | Bacteria | 852 | 0 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g1528 | i0 | 99.784 | 338 | 464 | 1 | 100 | 0 | 1 | 464 | 1570621 | 1570158 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 156832 | 857 | 0.99416569428238 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 8728474 | 8728474 | PRJNA383995_P_NODE_4147_length_305_cov_1.128906_g4048_i0 | PRJNA383995 | 4147 | 305 | 1.128906 | 3.4431633 | Exiguobacterium | 33986 | Bacteria | Bacteria | 551 | 2.2999999999999993e-152 | NTclustered | gi|2446540574|gb|CP118099.1| | 273528 | g4048 | i0 | 99.342 | 747.170491803279 | 304 | 2 | 99 | 0 | 1 | 304 | 386019 | 386322 | Exiguobacterium marinum strain a-1 chromosome, complete genome | blastn | 227887 | 551 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium marinum | |||
| 10609050 | 10609050 | PRJNA383995_P_NODE_12229_length_188_cov_1.158273_g12130_i0 | PRJNA383995 | 12229 | 188 | 1.158273 | 2.17755324 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 346 | 6.6e-91 | NTclustered | gi|2669659999|gb|CP090011.1| | 1290 | g12130 | i0 | 100 | 463.797872340426 | 187 | 0 | 99 | 0 | 2 | 188 | 1539884 | 1540070 | Staphylococcus hominis strain acrlg chromosome, complete genome | blastn | 87194 | 346 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 10609071 | 10609071 | PRJNA383995_P_NODE_18489_length_162_cov_0.902655_g18390_i0 | PRJNA383995 | 18489 | 162 | 0.902655 | 1.4623011 | Ruminococcus sp. | 41978 | Bacteria | Bacteria | 237 | 3.47e-58 | NTclustered | gi|2189459107|gb|CP091720.1| | 41978 | g18390 | i0 | 93.21 | 27.9753086419753 | 162 | 10 | 100 | 1 | 1 | 162 | 383055 | 383215 | MAG: Ruminococcus sp. isolate nC33_bin.6.fa chromosome | blastn | 4532 | 237 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminococcus | Ruminococcus sp. | ||
| 11278995 | 11278995 | PRJNA383995_P_NODE_11269_length_196_cov_0.870748_g11170_i0 | PRJNA383995 | 11269 | 196 | 0.870748 | 1.70666608 | Lactobacillus | 1578 | Bacteria | Bacteria | 363 | 6.899999999999998e-96 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g11170 | i0 | 100 | 426.05612244898 | 196 | 0 | 100 | 0 | 1 | 196 | 90717 | 90522 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 83507 | 363 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 12554449 | 12554449 | PRJNA383995_P_NODE_8050_length_227_cov_1.342697_g7951_i0 | PRJNA383995 | 8050 | 227 | 1.342697 | 3.04792219 | Streptococcus | 1301 | Bacteria | Bacteria | 377 | 2.9400000000000003e-100 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g7951 | i0 | 96.903 | 339.68281938326 | 226 | 5 | 99 | 2 | 2 | 226 | 1568960 | 1568736 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 77108 | 377 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 13159002 | 13159002 | PRJNA383995_P_NODE_18951_length_161_cov_0.910714_g18852_i0 | PRJNA383995 | 18951 | 161 | 0.910714 | 1.46624954 | Streptococcus oralis | 1303 | Bacteria | Bacteria | 254 | 3.42e-63 | NTclustered | gi|326682110|emb|FR720602.1| | 927666 | g18852 | i0 | 95.57 | 24.3850931677019 | 158 | 7 | 98 | 0 | 4 | 161 | 1040699 | 1040542 | Streptococcus oralis Uo5 complete genome sequence | blastn | 3926 | 254 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 15103604 | 15103604 | PRJNA383995_P_NODE_14912_length_169_cov_3.125000_g14813_i0 | PRJNA383995 | 14912 | 169 | 3.125 | 5.28125 | Lysinibacillus | 400634 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|2007734766|gb|CP071738.1| | 1421 | g14813 | i0 | 100 | 1025.12426035503 | 169 | 0 | 100 | 0 | 1 | 169 | 12458 | 12290 | Lysinibacillus sphaericus strain BS-pTAND672-2 chromosome | blastn | 173246 | 313 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Lysinibacillus | Lysinibacillus sphaericus | ||
| 16982641 | 16982641 | PRJNA383995_P_NODE_16154_length_166_cov_0.871795_g16055_i0 | PRJNA383995 | 16154 | 166 | 0.871795 | 1.4471797 | Staphylococcus cohnii | 29382 | Bacteria | Bacteria | 298 | 1.62e-76 | NTclustered | gi|2624852950|gb|CP119997.1| | 29382 | g16055 | i0 | 100 | 7.59036144578313 | 161 | 0 | 97 | 0 | 6 | 166 | 290118 | 289958 | Staphylococcus cohnii strain Dog166 chromosome, complete genome | blastn | 1260 | 298 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus cohnii | ||
| 16982651 | 16982651 | PRJNA383995_P_NODE_18234_length_162_cov_0.902655_g18135_i0 | PRJNA383995 | 18234 | 162 | 0.902655 | 1.4623011 | Bacillus paralicheniformis | 1648923 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|2006893320|dbj|AP023090.1| | 1648923 | g18135 | i0 | 99.383 | 99.6481481481482 | 162 | 1 | 100 | 0 | 1 | 162 | 3044268 | 3044429 | Bacillus paralicheniformis RSC-3 DNA, complete genome | blastn | 16143 | 294 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus paralicheniformis | ||
| 17653370 | 17653370 | PRJNA383995_P_NODE_12974_length_183_cov_1.067164_g12875_i0 | PRJNA383995 | 12974 | 183 | 1.067164 | 1.95291012 | Streptococcus | 1301 | Bacteria | Bacteria | 305 | 1.08e-78 | NTclustered | gi|2482045817|gb|CP121159.1| | 1311 | g12875 | i0 | 96.739 | 610.31693989071 | 184 | 5 | 100 | 1 | 1 | 183 | 93606 | 93789 | Streptococcus agalactiae strain S1 chromosome, complete genome | blastn | 111688 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus agalactiae | ||
| 18927312 | 18927312 | PRJNA383995_P_NODE_18515_length_162_cov_0.902655_g18416_i0 | PRJNA383995 | 18515 | 162 | 0.902655 | 1.4623011 | Lactobacillus | 1578 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g18416 | i0 | 100 | 584.759259259259 | 162 | 0 | 100 | 0 | 1 | 162 | 59085 | 59246 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 94731 | 300 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 27137919 | 27137919 | PRJNA383995_P_NODE_16622_length_165_cov_0.879310_g16523_i0 | PRJNA383995 | 16622 | 165 | 0.87931 | 1.4508615 | Levyella massiliensis | 938289 | Bacteria | Bacteria | 112 | 2.9e-28 | NR | WP_019190309.1 | 938289 | g16523 | i0 | 96.3 | 0.981818181818182 | 54 | 2 | 98.2 | 0 | 3 | 164 | 116 | 169 | WP_019190309.1 MaoC/PaaZ C-terminal domain-containing protein [Levyella massiliensis] | diamond | 162 | 112 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Levyella | Levyella massiliensis | |||
| 28085782 | 28085782 | PRJNA383995_P_NODE_17645_length_163_cov_0.894737_g17546_i0 | PRJNA383995 | 17645 | 163 | 0.894737 | 1.45842131 | Mediannikoviicoccus vaginalis | 2899727 | Bacteria | Bacteria | 92.4 | 3.82e-20 | NR | WP_237036350.1 | 2899727 | g17546 | i0 | 92.5 | 0.975460122699387 | 53 | 4 | 97.5 | 0 | 3 | 161 | 801 | 853 | WP_237036350.1 DNA mismatch repair protein MutS [Mediannikoviicoccus vaginalis] | diamond | 159 | 92.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Mediannikoviicoccus | Mediannikoviicoccus vaginalis | ||
| 28686007 | 28686007 | PRJNA383995_P_NODE_16987_length_164_cov_0.939130_g16888_i0 | PRJNA383995 | 16987 | 164 | 0.93913 | 1.5401732 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 43.1 | 0.00941 | NR | NLE68665.1 | 1898207 | g16888 | i0 | 51.4 | 0.676829268292683 | 37 | 15 | 67.7 | 1 | 3 | 113 | 97 | 130 | NLE68665.1 hypothetical protein [Clostridiales bacterium] | diamond | 111 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 30282037 | 30282037 | PRJNA383995_P_NODE_17892_length_163_cov_0.894737_g17793_i0 | PRJNA383995 | 17892 | 163 | 0.894737 | 1.45842131 | Bacteria | 2 | Bacteria | Bacteria | 106 | 7.45e-28 | NR | MBN9993869.1 | 1639 | g17793 | i0 | 100 | 3.97546012269939 | 54 | 0 | 99.4 | 0 | 163 | 2 | 28 | 81 | MBN9993869.1 hypothetical protein [Listeria monocytogenes] | diamond | 648 | 106 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 30439808 | 30439808 | PRJNA383995_P_NODE_18373_length_162_cov_0.902655_g18274_i0 | PRJNA383995 | 18373 | 162 | 0.902655 | 1.4623011 | Peptoniphilus | 162289 | Bacteria | Bacteria | 109 | 7e-27 | NR | WP_316714872.1 | 1175452 | g18274 | i0 | 100 | 1.96296296296296 | 53 | 0 | 98.1 | 0 | 3 | 161 | 305 | 357 | WP_316714872.1 Na+/H+ antiporter NhaC family protein, partial [Peptoniphilus rhinitidis] | diamond | 318 | 109 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | Peptoniphilus rhinitidis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;