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contig_metadata

9 rows where bioproject = "PRJNA382558" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382558 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8058182 8058182 PRJNA382558_S_NODE_3027_length_242_cov_6.814634_g3023_i0 PRJNA382558 3027 242 6.814634 16.49141428 Pelobacter propionicus 29543 Bacteria Bacteria 99 2.76e-16   NTclustered gi|118501159|gb|CP000482.1| 338966 g3023 i0 82.258 0.512396694214876 124 12 49 6 17 135 1952398 1952280 Pelobacter propionicus DSM 2379, complete genome blastn 124 99 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Pelobacter Pelobacter propionicus
23357006 23357006 PRJNA382558_S_NODE_4259_length_221_cov_6.896739_g4255_i0 PRJNA382558 4259 221 6.896739 15.24179319 Desulfobacula sp. 2593537 Bacteria Bacteria 138 1.0799999999999998e-37   NR MDA3787935.1 2593537 g4255 i0 88.9 13.6696832579186 72 8 97.7 0 3 218 21 92 MDA3787935.1 GDP-mannose 4,6-dehydratase [Desulfobacula sp.] diamond 3021 138 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacula Desulfobacula sp.
24631201 24631201 PRJNA382558_S_NODE_13280_length_158_cov_8.925620_g13276_i0 PRJNA382558 13280 158 8.92562 14.1024796 Desulfobacteraceae bacterium 4572_187 1971620 Bacteria Bacteria 67 3.19e-11   NR OQY09568.1 1971620 g13276 i0 56.9 3.53164556962025 51 16 85.4 1 20 154 411 461 OQY09568.1 MAG: hypothetical protein B6I30_09665 [Desulfobacteraceae bacterium 4572_187] diamond 558 67 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium 4572_187
28338501 28338501 PRJNA382558_S_NODE_7866_length_185_cov_9.641892_g7862_i0 PRJNA382558 7866 185 9.641892 17.8375002 Desulfuromonadales bacterium 2099678 Bacteria Bacteria 55.5 4.46e-8   NR MCK4508898.1 2099678 g7862 i0 48 1.60540540540541 50 25 79.5 1 165 19 44 93 MCK4508898.1 hypothetical protein [Desulfuromonadales bacterium] diamond 297 55.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales     Desulfuromonadales bacterium
28369952 28369952 PRJNA382558_S_NODE_11686_length_165_cov_5.109375_g11682_i0 PRJNA382558 11686 165 5.109375 8.43046875 Geobacteraceae bacterium 2282154 Bacteria Bacteria 41.6 0.0219   NR MDD2320802.1 2282154 g11682 i0 35.8 0.963636363636364 53 34 96.4 0 1 159 88 140 MDD2320802.1 hypothetical protein [Geobacteraceae bacterium] diamond 159 41.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
32383054 32383054 PRJNA382558_S_NODE_6959_length_192_cov_7.380645_g6955_i0 PRJNA382558 6959 192 7.380645 14.1708384 Trichlorobacter lovleyi 313985 Bacteria Bacteria 57.4 1.13e-7   NR WP_265555564.1 313985 g6955 i0 53.4 0.90625 58 27 90.6 0 8 181 252 309 WP_265555564.1 hypothetical protein [Trichlorobacter lovleyi] diamond 174 57.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Trichlorobacter Trichlorobacter lovleyi
32541549 32541549 PRJNA382558_S_NODE_679_length_347_cov_9.941935_g675_i0 PRJNA382558 679 347 9.941935 34.49851445 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 44.3 0.0295   NR MCL4243911.1 2080303 g675 i0 31.7 0.544668587896254 63 38 54.5 1 242 54 43 100 MCL4243911.1 pentapeptide repeat-containing protein [Candidatus Dadabacteria bacterium] diamond 189 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
32684061 32684061 PRJNA382558_S_NODE_4260_length_221_cov_6.885870_g4256_i0 PRJNA382558 4260 221 6.88587 15.2177727 Pseudomonadati 3379134 Bacteria Bacteria 59.7 2.71e-8   NR MDD4457013.1 29542 g4256 i0 46.9 1.38461538461538 64 30 81.4 2 185 6 33 96 MDD4457013.1 phosphoadenosine phosphosulfate reductase family protein [Syntrophotalea acetylenica] diamond 306 60.1 0.993344425956739 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Syntrophotaleaceae Syntrophotalea Syntrophotalea acetylenica
32793034 32793034 PRJNA382558_S_NODE_240_length_443_cov_7.778325_g236_i0 PRJNA382558 240 443 7.778325 34.45797975 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 90.1 1.01e-17   NR MEW6290971.1 2202153 g236 i0 52.4 0.55530474040632 82 39 55.5 0 258 13 1280 1361 MEW6290971.1 RHS repeat-associated core domain-containing protein [Thermodesulfobacteriota bacterium] diamond 246 90.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;