RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA382558" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA382558 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27644032 27644032 PRJNA382558_S_NODE_10964_length_168_cov_5.618321_g10960_i0 PRJNA382558 10964 168 5.618321 9.43877928 Brachionus plicatilis 10195 Rotifera other_Eukaryota 108 6.38e-28   NR RNA32099.1 10195 g10960 i0 91.1 1 56 5 100 0 168 1 108 163 RNA32099.1 hypothetical protein BpHYR1_050505 [Brachionus plicatilis] diamond 168 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28275178 28275178 PRJNA382558_S_NODE_7406_length_189_cov_5.125000_g7402_i0 PRJNA382558 7406 189 5.125 9.68625 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 42.4 0.0196   NR CAF0960475.1 1234261 g7402 i0 48.8 1.23809523809524 41 21 65.1 0 186 64 139 179 CAF0960475.1 unnamed protein product [Didymodactylos carnosus] diamond 234 42.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
28780320 28780320 PRJNA382558_S_NODE_12727_length_160_cov_18.861789_g12723_i0 PRJNA382558 12727 160 18.861789 30.1788624 Brachionus plicatilis 10195 Rotifera other_Eukaryota 88.6 7.17e-19   NR RNA42975.1 10195 g12723 i0 100 0.75 40 0 75 0 159 40 417 456 RNA42975.1 hypothetical protein BpHYR1_029794 [Brachionus plicatilis] diamond 120 88.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30833438 30833438 PRJNA382558_S_NODE_13294_length_158_cov_8.396694_g13290_i0 PRJNA382558 13294 158 8.396694 13.26677652 Brachionus plicatilis 10195 Rotifera other_Eukaryota 97.8 3.16e-22   NR RNA42975.1 10195 g13290 i0 96.2 0.987341772151899 52 2 98.7 0 156 1 362 413 RNA42975.1 hypothetical protein BpHYR1_029794 [Brachionus plicatilis] diamond 156 97.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;