RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where bioproject = "PRJNA382558" and tax_kingdom = "Fungi"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 33 ✖

tax_clade 1

bioproject 1

  • PRJNA382558 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405029 405029 PRJNA382558_S_NODE_8401_length_182_cov_5.565517_g8397_i0 PRJNA382558 8401 182 5.565517 10.12924094 Malassezia globosa 76773 Fungi Fungi 337 3.82e-88   NTclustered gi|1805972860|gb|CP046440.1| 76773 g8397 i0 100 75.8021978021978 182 0 100 0 1 182 29870 29689 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 13796 337 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
1075692 1075692 PRJNA382558_S_NODE_6441_length_196_cov_116.993711_g6437_i0 PRJNA382558 6441 196 116.993711 229.30767356 root 1 Root_unresolved Root_unresolved 357 3.2099999999999996e-94   NTclustered gi|283827979|gb|DQ008163.2| 5499 g6437 i0 99.49 109.005102040816 196 1 100 0 1 196 2773 2578 Passalora fulva strain CBS 119.46 28S large subunit ribosomal RNA gene, partial sequence blastn 21365 357 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Fulvia Fulvia fulva
2351039 2351039 PRJNA382558_S_NODE_10042_length_172_cov_28.503704_g10038_i0 PRJNA382558 10042 172 28.503704 49.02637088 Malassezia 55193 Fungi Fungi 318 1.2899999999999999e-82   NTclustered gi|56474918|gb|AY743630.1| 76773 g10038 i0 100 100 172 0 100 0 1 172 430 259 Malassezia globosa strain CBS 7966 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17200 318 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
2351097 2351097 PRJNA382558_S_NODE_262_length_432_cov_169.240506_g258_i0 PRJNA382558 262 432 169.240506 731.11898592 Periconia 97971 Fungi Fungi 780 0   NTclustered gi|2159202618|emb|OU941046.1| 175245 g258 i0 99.765 98.7453703703704 425 1 98 0 1 425 561 985 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02341 blastn 42658 780 1 Eukaryota Opisthokonta Fungi           uncultured fungus
2351129 2351129 PRJNA382558_S_NODE_942_length_322_cov_47.575439_g938_i0 PRJNA382558 942 322 47.575439 153.19291358 Periconia 97971 Fungi Fungi 579 1.1199999999999997e-160   NTclustered gi|259906177|gb|GQ844480.1| 175245 g938 i0 99.068 99.9037267080745 322 3 100 0 1 322 380 59 Uncultured fungus clone WD4-46 18S ribosomal RNA gene, partial sequence blastn 32169 579 1 Eukaryota Opisthokonta Fungi           uncultured fungus
4232075 4232075 PRJNA382558_S_NODE_4824_length_213_cov_29.039773_g4820_i0 PRJNA382558 4824 213 29.039773 61.85471649 Periconia banksiae 1050831 Fungi Fungi 388 1.26e-103   NTclustered gi|338809129|gb|JF951167.1| 1050831 g4820 i0 99.531 99.7887323943662 213 1 100 0 1 213 659 447 Noosia banksiae culture-collection CPC:17282 28S ribosomal RNA gene, partial sequence blastn 21255 388 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia banksiae
4903690 4903690 PRJNA382558_S_NODE_1864_length_274_cov_9.540084_g1860_i0 PRJNA382558 1864 274 9.540084 26.13983016 Malassezia 55193 Fungi Fungi 470 5.859999999999999e-128   NTclustered gi|2175024210|gb|OM190400.1| 76773 g1860 i0 97.802 99.6350364963504 273 5 99 1 1 273 41 312 Malassezia globosa strain SB930 small subunit ribosomal RNA gene, partial sequence blastn 27300 470 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
5508448 5508448 PRJNA382558_S_NODE_10265_length_171_cov_9.246269_g10261_i0 PRJNA382558 10265 171 9.246269 15.81111999 Periconia digitata 1303443 Fungi Fungi 202 1.34e-47   NTclustered gi|2452622577|ref|NC_071711.1| 1303443 g10261 i0 92.361 61.5380116959064 144 8 83 3 1 142 46900 46758 Periconia digitata strain Y3 mitochondrion, complete genome blastn 10523 202 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia digitata
6178697 6178697 PRJNA382558_S_NODE_265_length_431_cov_106.403553_g261_i0 PRJNA382558 265 431 106.403553 458.59931343 Pleosporales 92860 Fungi Fungi 728 0   NTclustered gi|1369210274|gb|KU981158.2| 97972 g261 i0 98.778 102.08120649652 409 5 100 0 1 409 542 950 Periconia macrospinosa strain WC10G1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 43997 732 0.994535519125683 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia macrospinosa
6178706 6178706 PRJNA382558_S_NODE_4005_length_224_cov_13.529412_g4001_i0 PRJNA382558 4005 224 13.529412 30.30588288 Agaricomycetes 155619 Fungi Fungi 409 1.03e-109   NTclustered gi|2120247073|gb|OK606155.1| 5353 g4001 i0 100 98.6607142857143 221 0 99 0 1 221 409 629 Lentinula edodes strain YS89 large subunit ribosomal RNA gene, partial sequence blastn 22100 409 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
8058112 8058112 PRJNA382558_S_NODE_1407_length_294_cov_7.856031_g1403_i0 PRJNA382558 1407 294 7.856031 23.09673114 Periconia digitata 1303443 Fungi Fungi 488 1.7499999999999996e-133   NTclustered gi|2452622577|ref|NC_071711.1| 1303443 g1403 i0 96.61 86.4829931972789 295 9 100 1 1 294 37717 38011 Periconia digitata strain Y3 mitochondrion, complete genome blastn 25426 488 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia digitata
8728354 8728354 PRJNA382558_S_NODE_1187_length_305_cov_26.276119_g1183_i0 PRJNA382558 1187 305 26.276119 80.14216295 Malassezia 55193 Fungi Fungi 558 1.37e-154   NTclustered gi|724086716|gb|KM269140.1| 76773 g1183 i0 99.672 98.383606557376993 305 1 100 0 1 305 1183 879 Malassezia globosa strain 123.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30007 558 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
9333050 9333050 PRJNA382558_S_NODE_6048_length_200_cov_7.730061_g6044_i0 PRJNA382558 6048 200 7.730061 15.460122 Periconia digitata 1303443 Fungi Fungi 171 4.599999999999999e-38   NTclustered gi|2452622577|ref|NC_071711.1| 1303443 g6044 i0 97.959 32.32 98 2 49 0 1 98 45634 45537 Periconia digitata strain Y3 mitochondrion, complete genome blastn 6464 171 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia digitata
10608824 10608824 PRJNA382558_S_NODE_8469_length_181_cov_10.090278_g8465_i0 PRJNA382558 8469 181 10.090278 18.26340318 Pseudopithomyces chartarum 1892770 Fungi Fungi 300 4.970000000000001e-77   NTclustered gi|1237408708|ref|NC_035636.1| 1892770 g8465 i0 99.394 93.767955801105 165 1 91 0 1 165 32977 33141 Pithomyces chartarum mitochondrion, complete genome blastn 16972 300 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymosphaeriaceae Pseudopithomyces Pseudopithomyces chartarum
10608841 10608841 PRJNA382558_S_NODE_9189_length_177_cov_6.621429_g9185_i0 PRJNA382558 9189 177 6.621429 11.71992933 Periconia digitata 1303443 Fungi Fungi 327 2.2199999999999996e-85   NTclustered gi|2452622577|ref|NC_071711.1| 1303443 g9185 i0 100 111.016949152542 177 0 100 0 1 177 48184 48008 Periconia digitata strain Y3 mitochondrion, complete genome blastn 19650 327 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia digitata
11278860 11278860 PRJNA382558_S_NODE_10629_length_169_cov_15.378788_g10625_i0 PRJNA382558 10629 169 15.378788 25.99015172 Basidiomycota 5204 Fungi Fungi 292 7.64e-75   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g10625 i0 98.204 98.585798816568 167 3 99 0 1 167 1301 1467 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 16661 292 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
11278944 11278944 PRJNA382558_S_NODE_69_length_605_cov_37.667254_g66_i0 PRJNA382558 69 605 37.667254 227.8868867 Eukaryota 2759 Fungi Fungi 1007 0   NTclustered gi|391883756|gb|JQ780632.1| 1198553 g66 i0 96.694 115.955371900826 605 20 100 0 1 605 1214 1818 Massarinaceae sp. 113 OG-2012 large subunit ribosomal RNA gene, partial sequence blastn 70153 1013 0.994076999012833 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Massarinaceae   Massarinaceae sp. 113 OG-2012
11883665 11883665 PRJNA382558_S_NODE_6630_length_195_cov_6.443038_g6626_i0 PRJNA382558 6630 195 6.443038 12.5639241 Malassezia restricta 76775 Fungi Fungi 357 3.19e-94   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6626 i0 100 53.574358974359 193 0 99 0 3 195 3356 3164 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 10447 357 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13158549 13158549 PRJNA382558_S_NODE_1331_length_297_cov_105.146154_g1327_i0 PRJNA382558 1331 297 105.146154 312.28407738 uncultured fungus 175245 Fungi Fungi 505 1.7599999999999995e-138   NTclustered gi|2414550579|gb|OQ066110.1| 175245 g1327 i0 97.306 100 297 8 100 0 1 297 11 307 Uncultured fungus clone Cluster_423 small subunit ribosomal RNA gene, partial sequence blastn 29700 505 1 Eukaryota Opisthokonta Fungi           uncultured fungus
15707572 15707572 PRJNA382558_S_NODE_1373_length_295_cov_106.344961_g1369_i0 PRJNA382558 1373 295 106.344961 313.71763495 Phoma sp. 1 OB-2014 1573585 Fungi Fungi 366 8.61e-97   NTclustered gi|724090723|gb|KM387394.1| 1573585 g1369 i0 89.456 93.0610169491525 294 25 99 3 3 295 7519 7231 Phoma sp. 1 OB-2014 28S-18S ribosomal RNA intergenic spacer, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27453 366 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma sp. 1 OB-2014
15707666 15707666 PRJNA382558_S_NODE_3413_length_234_cov_49.614213_g3409_i0 PRJNA382558 3413 234 49.614213 116.09725842 Cryptocoryneum condensatum 1763021 Fungi Fungi 405 1.4e-108   NTclustered gi|1187430660|gb|KY995559.1| 1763021 g3409 i0 97.863 111.615384615385 234 5 100 0 1 234 2847 3080 Cryptocoryneum condensatum voucher G.M. 2016-01-29.2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 26118 405 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales   Cryptocoryneum Cryptocoryneum condensatum
16378197 16378197 PRJNA382558_S_NODE_2473_length_254_cov_30.903226_g2469_i0 PRJNA382558 2473 254 30.903226 78.49419404 Malassezia 55193 Fungi Fungi 468 1.93e-127   NTclustered gi|613475760|gb|KJ174372.1| 76773 g2469 i0 100 99.5984251968504 253 0 99 0 1 253 338 590 Malassezia globosa strain KCTC27521 large subunit ribosomal RNA gene, partial sequence blastn 25298 468 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
18256368 18256368 PRJNA382558_S_NODE_15115_length_152_cov_26.539130_g15111_i0 PRJNA382558 15115 152 26.53913 40.3394776 Malassezia restricta 76775 Fungi Fungi 252 1.1399999999999999e-62   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g15111 i0 97.945 93.6513157894737 146 2 96 1 7 152 3209 3065 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 14235 252 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18256519 18256519 PRJNA382558_S_NODE_7995_length_184_cov_14.000000_g7991_i0 PRJNA382558 7995 184 14 25.76 Periconia digitata 1303443 Fungi Fungi 246 6.71e-61   NTclustered gi|2452622577|ref|NC_071711.1| 1303443 g7991 i0 91.304 68.8315217391304 184 10 100 5 1 184 45778 45955 Periconia digitata strain Y3 mitochondrion, complete genome blastn 12665 246 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia digitata
18927204 18927204 PRJNA382558_S_NODE_1715_length_280_cov_51.506173_g1711_i0 PRJNA382558 1715 280 51.506173 144.2172844 Pleosporales 92860 Fungi Fungi 448 2.8199999999999998e-121   NTclustered gi|2791117515|gb|PQ217832.1| 5599 g1711 i0 95.699 109.589285714286 279 10 99 2 3 280 4446 4169 Alternaria alternata isolate Karbala-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and external transcribed spacer, partial sequence blastn 30685 448 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
18927217 18927217 PRJNA382558_S_NODE_3675_length_229_cov_50.994792_g3671_i0 PRJNA382558 3675 229 50.994792 116.77807368 Periconia 97971 Fungi Fungi 403 4.899999999999998e-108   NTclustered gi|1167485301|gb|KY794707.1| 255782 g3671 i0 99.107 97.8165938864629 224 2 98 0 4 227 1040 817 Periconia minutissima strain MFLUCC 15-0245 large subunit ribosomal RNA gene, partial sequence blastn 22400 403 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia minutissima
19530700 19530700 PRJNA382558_S_NODE_15116_length_152_cov_14.495652_g15112_i0 PRJNA382558 15116 152 14.495652 22.03339104 Periconia digitata 1303443 Fungi Fungi 209 6.97e-50   NTclustered gi|2452622577|ref|NC_071711.1| 1303443 g15112 i0 93.617 55.5460526315789 141 7 92 2 3 142 47396 47535 Periconia digitata strain Y3 mitochondrion, complete genome blastn 8443 209 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Periconiaceae Periconia Periconia digitata
19530765 19530765 PRJNA382558_S_NODE_3676_length_229_cov_15.078125_g3672_i0 PRJNA382558 3676 229 15.078125 34.52890625 Wettsteinina lacustris 163246 Fungi Fungi 307 3.95e-79   NTclustered gi|206573595|gb|FJ190642.1| 163246 g3672 i0 97.253 77.8864628820961 182 4 79 1 49 229 385 566 Wettsteinina lacustris isolate AFTOL-ID 1592 12S small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 17836 307 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales   Wettsteinina Wettsteinina lacustris
19530855 19530855 PRJNA382558_S_NODE_8016_length_184_cov_8.469388_g8012_i0 PRJNA382558 8016 184 8.469388 15.58367392 Lentinula edodes 5353 Fungi Fungi 335 1.3899999999999996e-87   NTclustered gi|2723225103|dbj|LC813565.1| 5353 g8012 i0 99.457 99.9239130434783 184 1 100 0 1 184 963 780 Lentinula edodes BCRC:MU30948 DNA, clone Type1 blastn 18386 335 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
20201833 20201833 PRJNA382558_S_NODE_15436_length_151_cov_13.140351_g15432_i0 PRJNA382558 15436 151 13.140351 19.84193001 Malassezia 55193 Fungi Fungi 274 2.42e-69   NTclustered gi|953821272|gb|KT310070.1| 76773 g15432 i0 99.338 100.072847682119 151 1 100 0 1 151 679 829 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 15111 274 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
29001908 29001908 PRJNA382558_S_NODE_11668_length_165_cov_5.343750_g11664_i0 PRJNA382558 11668 165 5.34375 8.8171875 Lithohypha guttulata 1690604 Fungi Fungi 50.8 7.29e-6   NR KAK5104716.1 1690604 g11664 i0 53.3 0.818181818181818 45 21 81.8 0 165 31 76 120 KAK5104716.1 hypothetical protein LTS08_002608 [Lithohypha guttulata] diamond 135 50.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Lithohypha Lithohypha guttulata
29538178 29538178 PRJNA382558_S_NODE_1410_length_294_cov_7.182879_g1406_i0 PRJNA382558 1410 294 7.182879 21.11766426 Entrophospora candida 984092 Fungi Fungi 97.8 6.01e-22   NR CAG8686776.1 984092 g1406 i0 55.8 8.59183673469388 95 39 94.9 2 12 290 24 117 CAG8686776.1 14270_t:CDS:2, partial [Entrophospora candida] diamond 2526 97.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora candida
30864965 30864965 PRJNA382558_S_NODE_7094_length_191_cov_7.012987_g7090_i0 PRJNA382558 7094 191 7.012987 13.39480517 Hypomontagnella submonticulosa 152308 Fungi Fungi 41.6 0.0476   NR KAI2634769.1 152308 g7090 i0 44.2 0.675392670157068 43 24 67.5 0 160 32 190 232 KAI2634769.1 P-loop containing nucleoside triphosphate hydrolase protein [Hypomontagnella submonticulosa] diamond 129 41.6 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Hypoxylaceae Hypomontagnella Hypomontagnella submonticulosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;