contig_metadata
11 rows where bioproject = "PRJNA382558" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2351088 | 2351088 | PRJNA382558_S_NODE_15762_length_151_cov_3.622807_g15758_i0 | PRJNA382558 | 15762 | 151 | 3.622807 | 5.47043857 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 220 | 3.19e-53 | NTclustered | gi|2245450207|gb|CP083761.1| | 155894 | g15758 | i0 | 93.333 | 133.88079470198701 | 150 | 9 | 99 | 1 | 2 | 151 | 795199 | 795347 | Chroococcidiopsis sp. CCMEE 29 chromosome | blastn | 20216 | 220 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. CCMEE 29 | |
| 3626441 | 3626441 | PRJNA382558_S_NODE_2503_length_253_cov_10.703704_g2499_i0 | PRJNA382558 | 2503 | 253 | 10.703704 | 27.08037112 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 329 | 9.469999999999998e-86 | NTclustered | gi|2245450207|gb|CP083761.1| | 155894 | g2499 | i0 | 90.438 | 272.490118577075 | 251 | 23 | 100 | 1 | 1 | 250 | 792826 | 793076 | Chroococcidiopsis sp. CCMEE 29 chromosome | blastn | 68940 | 329 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. CCMEE 29 | |
| 3626459 | 3626459 | PRJNA382558_S_NODE_7623_length_187_cov_6.526667_g7619_i0 | PRJNA382558 | 7623 | 187 | 6.526667 | 12.20486729 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 252 | 1.47e-62 | NTclustered | gi|984535223|dbj|AP017367.1| | 1080068 | g7619 | i0 | 91.053 | 187.935828877005 | 190 | 11 | 99 | 6 | 1 | 185 | 1873435 | 1873247 | Leptolyngbya sp. O-77 DNA, complete genome | blastn | 35144 | 252 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbya | Leptolyngbya sp. O-77 | |
| 8058079 | 8058079 | PRJNA382558_S_NODE_12107_length_163_cov_5.547619_g12103_i0 | PRJNA382558 | 12107 | 163 | 5.547619 | 9.04261897 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 257 | 2.68e-64 | NTclustered | gi|225696191|gb|FJ805858.1| | 259957 | g12103 | i0 | 95.122 | 156.503067484663 | 164 | 6 | 100 | 2 | 1 | 163 | 1824 | 1662 | Uncultured Chroococcidiopsis sp. clone AS1_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 25510 | 257 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 14433550 | 14433550 | PRJNA382558_S_NODE_11852_length_164_cov_6.204724_g11848_i0 | PRJNA382558 | 11852 | 164 | 6.204724 | 10.17574736 | Brasilonema sennae | 1397703 | Bacteria | Bacteria | 279 | 5.77e-71 | NTclustered | gi|1702166658|gb|CP030118.1| | 415709 | g11848 | i0 | 97.546 | 234.34756097561 | 163 | 4 | 99 | 0 | 2 | 164 | 1168555 | 1168717 | Brasilonema sennae CENA114 chromosome | blastn | 38433 | 279 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Scytonemataceae | Brasilonema | Brasilonema sennae | |
| 17653307 | 17653307 | PRJNA382558_S_NODE_7314_length_189_cov_10.256579_g7310_i0 | PRJNA382558 | 7314 | 189 | 10.256579 | 19.38493431 | Nostocales | 1161 | Bacteria | Bacteria | 305 | 1.13e-78 | NTclustered | gi|46409894|gb|AY584519.1| | 63737 | g7310 | i0 | 95.767 | 209.417989417989 | 189 | 8 | 100 | 0 | 1 | 189 | 732 | 544 | Nostoc punctiforme PCC 73102 23S ribosomal RNA gene, partial sequence | blastn | 39580 | 307 | 0.993485342019544 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc punctiforme | |
| 19530752 | 19530752 | PRJNA382558_S_NODE_3036_length_242_cov_6.429268_g3032_i0 | PRJNA382558 | 3036 | 242 | 6.429268 | 15.55882856 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 357 | 4.13e-94 | NTclustered | gi|225696175|gb|FJ805842.1| | 259957 | g3032 | i0 | 93.416 | 193.045454545455 | 243 | 12 | 99 | 4 | 1 | 240 | 2046 | 2287 | Uncultured Chroococcidiopsis sp. clone AU1_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 46717 | 357 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 22081304 | 22081304 | PRJNA382558_S_NODE_13838_length_156_cov_10.739496_g13834_i0 | PRJNA382558 | 13838 | 156 | 10.739496 | 16.75361376 | Gloeocapsa sp. 20201027-1 | 2802214 | Bacteria | Bacteria | 233 | 4.2799999999999995e-57 | NTclustered | gi|1953559107|gb|MW449597.1| | 2802214 | g13834 | i0 | 94.737 | 151.032051282051 | 152 | 5 | 97 | 1 | 1 | 152 | 293 | 441 | Gloeocapsa sp. 20201027-1 23S ribosomal RNA gene, partial sequence | blastn | 23561 | 233 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Chroococcaceae | Gloeocapsa | Gloeocapsa sp. 20201027-1 | |
| 24631313 | 24631313 | PRJNA382558_S_NODE_4100_length_223_cov_6.295699_g4096_i0 | PRJNA382558 | 4100 | 223 | 6.295699 | 14.03940877 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 261 | 3.02e-65 | NTclustered | gi|225696259|gb|FJ805926.1| | 259957 | g4096 | i0 | 88.732 | 121.345291479821 | 213 | 24 | 96 | 0 | 11 | 223 | 3244 | 3456 | Uncultured Chroococcidiopsis sp. clone AS3_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 27060 | 261 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 32256859 | 32256859 | PRJNA382558_S_NODE_12118_length_163_cov_5.325397_g12114_i0 | PRJNA382558 | 12118 | 163 | 5.325397 | 8.68039711 | Nostoc sp. CMAA16 | 1180 | Bacteria | Bacteria | 106 | 6.7599999999999985e-28 | NR | WP_236145141.1 | 2055159 | g12114 | i0 | 94.4 | 0.993865030674847 | 54 | 3 | 99.4 | 0 | 2 | 163 | 18 | 71 | WP_236145141.1 VOC family protein [Nostoc sp. CMAA1605] | diamond | 162 | 106 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. CMAA1605 | |
| 32478194 | 32478194 | PRJNA382558_S_NODE_2919_length_244_cov_7.913043_g2915_i0 | PRJNA382558 | 2919 | 244 | 7.913043 | 19.30782492 | Nostoc sp. CMAA16 | 1180 | Bacteria | Bacteria | 113 | 5.25e-30 | NR | WP_236145141.1 | 2055159 | g2915 | i0 | 88.1 | 1.45081967213115 | 59 | 7 | 72.5 | 0 | 242 | 66 | 80 | 138 | WP_236145141.1 VOC family protein [Nostoc sp. CMAA1605] | diamond | 354 | 113 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. CMAA1605 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;