RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA382558" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJNA382558 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10608786 10608786 PRJNA382558_S_NODE_6269_length_198_cov_6.621118_g6265_i0 PRJNA382558 6269 198 6.621118 13.10981364 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 209 9.63e-50   NTclustered gi|2874254095|emb|OY970178.1| 2212470 g6265 i0 85.93 128.762626262626 199 24 99 4 1 197 1735400 1735596 MAG: Candidatus Eisenbacteria bacterium isolate MFD05942.bin.c.1 genome assembly, chromosome: 1 blastn 25495 209 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
19530666 19530666 PRJNA382558_S_NODE_13156_length_159_cov_5.139344_g13152_i0 PRJNA382558 13156 159 5.139344 8.17155696 candidate division TM6 bacterium Zodletone_IIa 1511133 Bacteria Bacteria 99.8 4.47e-25   NR KHD90160.1 1511133 g13152 i0 100 3 53 0 100 0 1 159 85 137 KHD90160.1 hypothetical protein AH06_01250, partial [candidate division TM6 bacterium Zodletone_IIa] diamond 477 99.8 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium Zodletone_IIa
26885478 26885478 PRJNA382558_S_NODE_14541_length_154_cov_7.136752_g14537_i0 PRJNA382558 14541 154 7.136752 10.99059808 Patescibacteria group bacterium 2052139 Bacteria Bacteria 55.8 2.56e-8   NR MFA5996095.1 2052139 g14537 i0 51 0.954545454545455 49 22 95.5 1 148 2 12 58 MFA5996095.1 hypothetical protein [Patescibacteria group bacterium] diamond 147 55.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27011814 27011814 PRJNA382558_S_NODE_1902_length_273_cov_7.266949_g1898_i0 PRJNA382558 1902 273 7.266949 19.83877077 Patescibacteria group bacterium 2052139 Bacteria Bacteria 124 8.26e-31   NR HYV86187.1 2052139 g1898 i0 65.9 0.967032967032967 88 30 96.7 0 8 271 326 413 HYV86187.1 hypothetical protein [Patescibacteria group bacterium] diamond 264 124 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27043533 27043533 PRJNA382558_S_NODE_3362_length_235_cov_13.040404_g3358_i0 PRJNA382558 3362 235 13.040404 30.6449494 Patescibacteria group bacterium 2052139 Bacteria Bacteria 44.7 0.00312   NR MFA5996101.1 2052139 g3358 i0 31.9 0.880851063829787 69 41 80.4 1 18 206 37 105 MFA5996101.1 hypothetical protein [Patescibacteria group bacterium] diamond 207 44.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29759141 29759141 PRJNA382558_S_NODE_8311_length_182_cov_8.937931_g8307_i0 PRJNA382558 8311 182 8.937931 16.26703442 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 73.9 8.44e-14   NR MBI3735218.1 2107588 g8307 i0 56.4 0.906593406593407 55 24 90.7 0 181 17 126 180 MBI3735218.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 165 73.9 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31180656 31180656 PRJNA382558_S_NODE_4935_length_212_cov_6.902857_g4931_i0 PRJNA382558 4935 212 6.902857 14.63405684 Patescibacteria group bacterium 2052139 Bacteria Bacteria 51.6 1.86e-5   NR MDE2099859.1 2052139 g4931 i0 36.6 1.00471698113208 71 44 99.1 1 210 1 218 288 MDE2099859.1 AAA family ATPase [Patescibacteria group bacterium] diamond 213 51.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31845079 31845079 PRJNA382558_S_NODE_14177_length_155_cov_8.720339_g14173_i0 PRJNA382558 14177 155 8.720339 13.51652545 Candidatus Schekmanbacteria bacterium 2419984 Bacteria Bacteria 55.1 4.69e-7   NR MBI2566893.1 2419984 g14173 i0 45.1 0.987096774193548 51 28 98.7 0 153 1 164 214 MBI2566893.1 hypothetical protein [Candidatus Schekmanbacteria bacterium] diamond 153 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium
32824813 32824813 PRJNA382558_S_NODE_11620_length_165_cov_6.257812_g11616_i0 PRJNA382558 11620 165 6.257812 10.3253898 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 90.1 6.29e-20   NR HVX56891.1 2973664 g11616 i0 85.5 1 55 8 100 0 165 1 73 127 HVX56891.1 IS3 family transposase [Candidatus Saccharimonadales bacterium] diamond 165 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;