RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27896276 27896276 PRJNA382357_P_NODE_88045_length_256_cov_1.333333_g87306_i0 PRJNA382357 88045 256 1.333333 3.41333248 Sulfolobus sp. A2 2288 Archaea Archaea 79 6.77e-15   NR TRM73985.1 2200880 g87306 i0 72.5 0.59765625 51 14 59.8 0 252 100 164 214 TRM73985.1 hypothetical protein DJ532_14000 [Sulfolobus sp. A20-N-F8] diamond 153 79 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. A20-N-F8
31180536 31180536 PRJNA382357_P_NODE_111815_length_230_cov_3.508876_g111076_i0 PRJNA382357 111815 230 3.508876 8.0704148 Pyrobaculum arsenaticum 121277 Archaea Archaea 113 9.43e-28   NR WP_345803900.1 121277 g111076 i0 91.7 0.782608695652174 60 5 78.3 0 223 44 153 212 WP_345803900.1 flagellar hook-associated protein FlgL [Pyrobaculum arsenaticum] diamond 180 113 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum arsenaticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;