RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27959432 27959432 PRJNA382357_P_NODE_153025_length_203_cov_0.915493_g152286_i0 PRJNA382357 153025 203 0.915493 1.85845079 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 56.2 2.47e-7   NR MBR3477041.1 2517205 g152286 i0 61.9 2.63054187192118 42 15 60.6 1 75 197 2 43 MBR3477041.1 hypothetical protein [Candidatus Methanomethylophilaceae archaeon] diamond 534 56.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
31956913 31956913 PRJNA382357_P_NODE_40797_length_359_cov_2.184564_g40058_i0 PRJNA382357 40797 359 2.184564 7.84258476 root 1 Root_unresolved Root_unresolved 52 4.38e-5   NR MEK9694248.1 2163009 g40058 i0 45.1 1.7966573816156 71 38 58.5 1 78 287 138 208 MEK9694248.1 DUF6682 family protein [Candidatus Poseidoniales archaeon] diamond 645 52 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;