RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA382357 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6177849 6177849 PRJNA382357_P_NODE_169625_length_172_cov_116.792793_g168886_i0 PRJNA382357 169625 172 116.792793 200.88360396 Pseudomonadati 3379134 Bacteria Bacteria 143 8.32e-30   NTclustered gi|2874254090|emb|OY970173.1| 2053570 g168886 i0 95.506 72.9244186046512 89 4 52 0 1 89 1539643 1539555 MAG: Candidatus Latescibacteria bacterium isolate MFD02242.bin.1.32 genome assembly, chromosome: 1 blastn 12543 143 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32320107 32320107 PRJNA382357_P_NODE_86739_length_257_cov_30.158163_g86000_i0 PRJNA382357 86739 257 30.158163 77.50647891 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 78.2 1.48e-14   NR MFA6110312.1 2053570 g86000 i0 56.3 1.49416342412451 64 28 74.7 0 57 248 453 516 MFA6110312.1 APC family permease [Candidatus Latescibacterota bacterium] diamond 384 78.2 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;