RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA382357" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26822023 26822023 PRJNA382357_P_NODE_131161_length_213_cov_3.276316_g130422_i0 PRJNA382357 131161 213 3.276316 6.97855308 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 81.6 2.18e-16   NR HSU56765.1 2052315 g130422 i0 77.8 0.633802816901408 45 10 63.4 0 201 67 237 281 HSU56765.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 135 81.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
26870885 26870885 PRJNA382357_P_NODE_117001_length_226_cov_0.927273_g116262_i0 PRJNA382357 117001 226 0.927273 2.09563698 PVC group 1783257 Bacteria Bacteria 73.2 5.64e-13   NR HYW66395.1 2052315 g116262 i0 82.1 2.58849557522124 39 7 51.8 0 118 2 362 400 HYW66395.1 AMP-binding protein [Candidatus Dormiibacterota bacterium] diamond 585 73.6 0.994565217391304 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29239473 29239473 PRJNA382357_P_NODE_49269_length_330_cov_6.676580_g48530_i0 PRJNA382357 49269 330 6.67658 22.032714 Bacteria 2 Bacteria Bacteria 127 1.0599999999999998e-31   NR HYW65073.1 2052315 g48530 i0 74.1 8.48181818181818 81 21 73.6 0 285 43 76 156 HYW65073.1 alpha-amylase family glycosyl hydrolase [Candidatus Dormiibacterota bacterium] diamond 2799 127 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31845011 31845011 PRJNA382357_P_NODE_24177_length_454_cov_1.338422_g23440_i0 PRJNA382357 24177 454 1.338422 6.07643588 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 45.4 0.0268   NR HVB87814.1 2052315 g23440 i0 27.9 0.92511013215859 140 76 91.9 5 419 3 81 196 HVB87814.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 420 45.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;