RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357" and tax_phylum = "Balneolota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA382357 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1679422 1679422 PRJNA382357_P_NODE_90562_length_253_cov_1.354167_g89823_i0 PRJNA382357 90562 253 1.354167 3.42604251 Balneola sp. 2024824 Bacteria Bacteria 89.8 1.75e-13   NTclustered gi|2021960826|gb|CP051255.1| 2024824 g89823 i0 86.42 11.8300395256917 81 11 32 0 167 247 189859 189939 MAG: Balneola sp. isolate EhC07 chromosome blastn 2993 89.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
28085758 28085758 PRJNA382357_P_NODE_94345_length_248_cov_3.663102_g93606_i0 PRJNA382357 94345 248 3.663102 9.08449296 Balneolaceae bacterium 2053516 Bacteria Bacteria 45.8 0.00329   NR MFA5669444.1 2053516 g93606 i0 48.1 0.653225806451613 54 28 65.3 0 62 223 821 874 MFA5669444.1 DNA polymerase [Balneolaceae bacterium] diamond 162 45.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;