contig_metadata
5 rows where bioproject = "PRJNA382357", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22751525 | 22751525 | PRJNA382357_P_NODE_146478_length_206_cov_0.896552_g145739_i0 | PRJNA382357 | 146478 | 206 | 0.896552 | 1.84689712 | Pyramidobacter | 638847 | Bacteria | Bacteria | 60.2 | 1.08e-4 | NTclustered | gi|2188906985|dbj|AP025585.1| | 638849 | g145739 | i0 | 90.909 | 0.815533980582524 | 44 | 4 | 21 | 0 | 113 | 156 | 1866555 | 1866598 | Pyramidobacter piscolens CE91-St28 DNA, complete genome | blastn | 168 | 60.2 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Dethiosulfovibrionaceae | Pyramidobacter | Pyramidobacter piscolens | ||
| 27328085 | 27328085 | PRJNA382357_P_NODE_59683_length_303_cov_6.884298_g58944_i0 | PRJNA382357 | 59683 | 303 | 6.884298 | 20.85942294 | Thermovirga lienii DSM 17291 | 580340 | Bacteria | Bacteria | 106 | 3.75e-24 | NR | AER66996.1 | 580340 | g58944 | i0 | 67.5 | 0.762376237623762 | 77 | 24 | 76.2 | 1 | 286 | 56 | 469 | 544 | AER66996.1 Protein of unknown function DUF2044, membrane [Thermovirga lienii DSM 17291] | diamond | 231 | 106 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Thermovirgaceae | Thermovirga | Thermovirga lienii | ||
| 29302535 | 29302535 | PRJNA382357_P_NODE_112049_length_230_cov_1.881657_g111310_i0 | PRJNA382357 | 112049 | 230 | 1.881657 | 4.3278111 | root | 1 | Root_unresolved | Root_unresolved | 55.8 | 7.39e-7 | NR | HQK25924.1 | 2053624 | g111310 | i0 | 42.2 | 5.4 | 64 | 37 | 83.5 | 0 | 222 | 31 | 262 | 325 | HQK25924.1 Hsp70 family protein [Synergistaceae bacterium] | diamond | 1242 | 56.2 | 0.99288256227758 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 29506583 | 29506583 | PRJNA382357_P_NODE_95410_length_247_cov_1.747312_g94671_i0 | PRJNA382357 | 95410 | 247 | 1.747312 | 4.31586064 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 58.2 | 1.41e-7 | NR | WP_015555829.1 | 651822 | g94671 | i0 | 79.4 | 0.412955465587045 | 34 | 7 | 41.3 | 0 | 102 | 1 | 1 | 34 | WP_015555829.1 efflux RND transporter periplasmic adaptor subunit [Fretibacterium fastidiosum] | diamond | 102 | 58.2 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 31117436 | 31117436 | PRJNA382357_P_NODE_133075_length_212_cov_1.291391_g132336_i0 | PRJNA382357 | 133075 | 212 | 1.291391 | 2.73774892 | uncultured Fretibacterium sp. | 1678694 | Bacteria | Bacteria | 72.8 | 9.69e-14 | NR | WP_299299478.1 | 1678694 | g132336 | i0 | 76.6 | 0.665094339622642 | 47 | 11 | 66.5 | 0 | 4 | 144 | 150 | 196 | WP_299299478.1 hypothetical protein, partial [uncultured Fretibacterium sp.] | diamond | 141 | 72.8 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | uncultured Fretibacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;