RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA382357" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA382357 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1074759 1074759 PRJNA382357_P_NODE_158341_length_198_cov_5.007299_g157602_i0 PRJNA382357 158341 198 5.007299 9.91445202 root 1 Root_unresolved Root_unresolved 200 5.79e-47   NTclustered gi|14974|emb|V00606.1| 10863 g157602 i0 100 105.050505050505 108 0 100 0 91 198 6306 6199 Genome of bacteriophage f1 (closely related to phages fd and m13) blastn 20800 200 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Inovirus Inovirus M13
2954543 2954543 PRJNA382357_P_NODE_48203_length_334_cov_1.296703_g47464_i0 PRJNA382357 48203 334 1.296703 4.33098802 Inoviridae sp. 2219103 Viruses Viruses 407 5.829999999999999e-109   NTclustered gi|2057778617|tpg|BK054669.1| 2219103 g47464 i0 90.554 12.3502994011976 307 29 92 0 1 307 7011 7317 MAG TPA_asm: Inoviridae sp. isolate ct21f1, partial genome blastn 4125 407 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
8057454 8057454 PRJNA382357_P_NODE_65787_length_291_cov_1.282609_g65048_i0 PRJNA382357 65787 291 1.282609 3.73239219 Inoviridae sp. 2219103 Viruses Viruses 276 1.47e-69   NTclustered gi|2906152048|gb|PQ646632.1| 2219103 g65048 i0 96.951 0.563573883161512 164 5 56 0 128 291 464 301 MAG: Inoviridae sp. isolate k127_3879901 genomic sequence blastn 164 276 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18255533 18255533 PRJNA382357_P_NODE_52975_length_320_cov_1.335907_g52236_i0 PRJNA382357 52975 320 1.335907 4.2749024 Inoviridae sp. 2219103 Viruses Viruses 429 1.19e-115   NTclustered gi|2056867760|tpg|BK044621.1| 2219103 g52236 i0 96.183 11.9625 262 10 82 0 59 320 6917 6656 MAG TPA_asm: Inoviridae sp. isolate ctOUb3, partial genome blastn 3828 429 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;