RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27106559 27106559 PRJNA382357_P_NODE_77142_length_271_cov_2.380952_g76403_i0 PRJNA382357 77142 271 2.380952 6.45237992 Lentisphaerota bacterium 1932692 Bacteria Bacteria 134 1.51e-34   NR MBM4154803.1 1932692 g76403 i0 75.6 0.863468634686347 78 19 86.3 0 37 270 424 501 MBM4154803.1 DUF4038 domain-containing protein [Lentisphaerota bacterium] diamond 234 134 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
29948714 29948714 PRJNA382357_P_NODE_118931_length_224_cov_1.515337_g118192_i0 PRJNA382357 118931 224 1.515337 3.39435488 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.1 0.0212   NR MBQ7695509.1 2053569 g118192 i0 42.1 0.508928571428571 38 21 49.6 1 59 169 410 447 MBQ7695509.1 hypothetical protein [Lentisphaeria bacterium] diamond 114 43.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;