RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28260427 28260427 PRJNA382357_P_NODE_159806_length_195_cov_10.029851_g159067_i0 PRJNA382357 159806 195 10.029851 19.55820945 Pseudomonadati 3379134 Bacteria Bacteria 42.4 0.0247   NR HEY5869191.1 2528274 g159067 i0 43.6 1.2 39 22 60 0 126 10 88 126 HEY5869191.1 class I SAM-dependent methyltransferase [Candidatus Tectimicrobiota bacterium] diamond 234 42.7 0.992974238875878 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32824783 32824783 PRJNA382357_P_NODE_57680_length_308_cov_1.578947_g56941_i0 PRJNA382357 57680 308 1.578947 4.86315676 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 43.5 0.0412   NR MBI2875840.1 2528274 g56941 i0 30.2 0.516233766233766 53 37 51.6 0 14 172 260 312 MBI2875840.1 outer membrane lipoprotein-sorting protein [Candidatus Tectimicrobiota bacterium] diamond 159 43.5 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;