RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357", tax_clade = "Luna-1 subcluster" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJNA382357 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8056991 8056991 PRJNA382357_P_NODE_39547_length_364_cov_2.884488_g38808_i0 PRJNA382357 39547 364 2.884488 10.49953632 Microbacteriaceae 85023 Bacteria Bacteria 176 1.24e-49   NR WP_070955133.1 535712 g38808 i0 94.3 39.2225274725275 88 5 72.5 0 97 360 67 154 WP_070955133.1 urocanate hydratase [Candidatus Rhodoluna planktonica] diamond 14277 177 0.994350282485876 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Candidatus Rhodoluna planktonica
22752236 22752236 PRJNA382357_P_NODE_66118_length_290_cov_2.183406_g65379_i0 PRJNA382357 66118 290 2.183406 6.3318774 Rhodoluna 529883 Bacteria Bacteria 459 1.3499999999999999e-124   NTclustered gi|1666461687|gb|CP040509.1| 232537 g65379 i0 95.172 439.058620689655 290 14 100 0 1 290 477673 477384 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 127327 459 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;