RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA382357", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA382357 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26916894 26916894 PRJNA382357_P_NODE_19562_length_497_cov_5.385321_g18829_i0 PRJNA382357 19562 497 5.385321 26.76504537 Fidelibacterota bacterium 2026760 Bacteria Bacteria 99.4 2.48e-21   NR MDK2975650.1 2026760 g18829 i0 33.8 3.14486921529175 130 86 78.5 0 486 97 140 269 MDK2975650.1 magnesium transporter [Fidelibacterota bacterium] diamond 1563 99.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27408348 27408348 PRJNA382357_P_NODE_147743_length_205_cov_1.701389_g147004_i0 PRJNA382357 147743 205 1.701389 3.48784745 Bacteria 2 Bacteria Bacteria 45.8 0.00146   NR MBC8312384.1 2026760 g147004 i0 51.4 2.89756097560976 37 18 54.1 0 94 204 86 122 MBC8312384.1 hypothetical protein [Fidelibacterota bacterium] diamond 594 45.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28117224 28117224 PRJNA382357_P_NODE_161605_length_192_cov_8.083969_g160866_i0 PRJNA382357 161605 192 8.083969 15.52122048 Fidelibacterota bacterium 2026760 Bacteria Bacteria 65.5 1.07e-10   NR MFA5706739.1 2026760 g160866 i0 92.9 1.3125 28 2 43.8 0 84 1 109 136 MFA5706739.1 site-specific DNA-methyltransferase [Fidelibacterota bacterium] diamond 252 65.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28292033 28292033 PRJNA382357_P_NODE_154706_length_202_cov_1.801418_g153967_i0 PRJNA382357 154706 202 1.801418 3.63886436 root 1 Root_unresolved Root_unresolved 48.9 1.42e-4   NR MFA5436918.1 2026760 g153967 i0 57.5 5.79207920792079 40 17 59.4 0 65 184 173 212 MFA5436918.1 hypothetical protein [Fidelibacterota bacterium] diamond 1170 48.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;