RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA382357", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
404186 404186 PRJNA382357_P_NODE_65181_length_292_cov_1.688312_g64442_i0 PRJNA382357 65181 292 1.688312 4.92987104 Percolomonas cosmopolitus 63605 Heterolobosea other_Eukaryota 254 6.91e-63   NTclustered gi|2043511950|gb|MZ264846.1| 63605 g64442 i0 92.265 12.027397260274 181 10 92 4 110 288 1652 1474 Percolomonas cosmopolitus strain HFCC 1 small subunit ribosomal RNA gene, partial sequence blastn 3512 254 1 Eukaryota Discoba   Heterolobosea     Percolomonadidae Percolomonas Percolomonas cosmopolitus
1677336 1677336 PRJNA382357_P_NODE_118682_length_224_cov_1.993865_g117943_i0 PRJNA382357 118682 224 1.993865 4.4662576 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 159 1.14e-34   NTclustered gi|2031941177|emb|OD957840.1| 5763 g117943 i0 89.764 32.1160714285714 127 9 55 3 96 218 261 387 Naegleria fowleri Karachi_NF001 strain blastn 7194 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;