RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA382357" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA382357 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
404186 404186 PRJNA382357_P_NODE_65181_length_292_cov_1.688312_g64442_i0 PRJNA382357 65181 292 1.688312 4.92987104 Percolomonas cosmopolitus 63605 Heterolobosea other_Eukaryota 254 6.91e-63   NTclustered gi|2043511950|gb|MZ264846.1| 63605 g64442 i0 92.265 12.027397260274 181 10 92 4 110 288 1652 1474 Percolomonas cosmopolitus strain HFCC 1 small subunit ribosomal RNA gene, partial sequence blastn 3512 254 1 Eukaryota Discoba   Heterolobosea     Percolomonadidae Percolomonas Percolomonas cosmopolitus
1677336 1677336 PRJNA382357_P_NODE_118682_length_224_cov_1.993865_g117943_i0 PRJNA382357 118682 224 1.993865 4.4662576 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 159 1.14e-34   NTclustered gi|2031941177|emb|OD957840.1| 5763 g117943 i0 89.764 32.1160714285714 127 9 55 3 96 218 261 387 Naegleria fowleri Karachi_NF001 strain blastn 7194 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10002838 10002838 PRJNA382357_P_NODE_151428_length_204_cov_0.909091_g150689_i0 PRJNA382357 151428 204 0.909091 1.85454564 Leishmania 5658 Euglenozoa other_Eukaryota 54.7 0.005   NTclustered gi|1751371445|tpg|BK010876.1| 5670 g150689 i0 100 1.26470588235294 29 0 14 0 39 67 5131 5159 TPA_asm: Leishmania guyanensis strain MCAN kinetoplast, complete sequence blastn 258 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania guyanensis
11882528 11882528 PRJNA382357_P_NODE_44510_length_346_cov_1.291228_g43771_i0 PRJNA382357 44510 346 1.291228 4.46764888 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 54.7 0.009   NTclustered gi|1031970226|gb|CP015660.1| 85057 g43771 i0 100 0.0838150289017341 29 0 8 0 185 213 966345 966373 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI10, partial sequence blastn 29 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
16979708 16979708 PRJNA382357_P_NODE_105254_length_236_cov_23.531429_g104515_i0 PRJNA382357 105254 236 23.531429 55.53417244 Procryptobia sorokini 351715 Euglenozoa other_Eukaryota 246 9.05e-61   NTclustered gi|197723538|gb|EF681923.2| 351715 g104515 i0 96.026 149.970338983051 151 6 100 0 86 236 424 274 Procryptobia sorokini strain HFCC98 28S ribosomal RNA gene, partial sequence blastn 35393 246 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sorokini
18926882 18926882 PRJNA382357_P_NODE_69255_length_284_cov_3.493274_g68516_i0 PRJNA382357 69255 284 3.493274 9.92089816 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 1.51e-27   NR NP_044782.1 48483 g68516 i0 74.6 5.15492957746479 71 18 75 0 35 247 119 189 NP_044782.1 NADH dehydrogenase subunit 7 [Reclinomonas americana] diamond 1464 114 0.991228070175439 Eukaryota Discoba       Jakobida Histionidae Reclinomonas Reclinomonas americana
27612255 27612255 PRJNA382357_P_NODE_119244_length_224_cov_1.036810_g118505_i0 PRJNA382357 119244 224 1.03681 2.3224544 Bodo saltans 75058 Euglenozoa other_Eukaryota 46.6 0.00127   NR CUG86635.1 75058 g118505 i0 37.1 0.9375 70 36 93.8 1 216 7 399 460 CUG86635.1 heat shock protein 70, putative [Bodo saltans] diamond 210 46.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30233004 30233004 PRJNA382357_P_NODE_130012_length_214_cov_2.483660_g129273_i0 PRJNA382357 130012 214 2.48366 5.3150324 Leishmania tarentolae 5689 Euglenozoa other_Eukaryota 42 0.0493   NR GET92619.1 5689 g129273 i0 32.7 0.728971962616822 52 33 70.1 1 62 211 50 101 GET92619.1 oligosaccharyl transferase-like protein [Leishmania tarentolae] diamond 156 42 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;