contig_metadata
25 rows where bioproject = "PRJNA380660" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2349565 | 2349565 | PRJNA380660_P_NODE_7182_length_271_cov_2.900826_g6782_i0 | PRJNA380660 | 7182 | 271 | 2.900826 | 7.86123846 | Viruses | 10239 | Viruses | Viruses | 298 | 2.89e-76 | NTclustered | gi|2214231626|gb|OM622299.1| | 1955153 | g6782 | i0 | 98.802 | 2.03690036900369 | 167 | 2 | 100 | 0 | 105 | 271 | 5531 | 5697 | MAG: Picornavirales sp. isolate HPLV-44 genomic sequence | blastn | 552 | 298 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornavirales sp. | ||||
| 7452205 | 7452205 | PRJNA380660_P_NODE_7406_length_265_cov_1.766949_g7006_i0 | PRJNA380660 | 7406 | 265 | 1.766949 | 4.68241485 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.007 | NTclustered | gi|1720276672|gb|MK959613.1| | 10493 | g7006 | i0 | 96.97 | 5.8377358490566 | 33 | 0 | 12 | 1 | 180 | 212 | 51119 | 51088 | Frog virus 3 strain Z920 | blastn | 1547 | 54.7 | 1 | Viruses | Bamfordvirae | Nucleocytoviricota | Megaviricetes | Pimascovirales | Iridoviridae | Ranavirus | Ranavirus rana1 | ||
| 10606005 | 10606005 | PRJNA380660_P_NODE_6809_length_283_cov_1587.318898_g6409_i0 | PRJNA380660 | 6809 | 283 | 1587.318898 | 4492.11248134 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 54.7 | 0.007 | NTclustered | gi|2046846597|emb|OU077603.1| | 2697049 | g6409 | i0 | 100 | 0.102473498233216 | 29 | 0 | 10 | 0 | 255 | 283 | 30001 | 30029 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 13156006 | 13156006 | PRJNA380660_P_NODE_8751_length_230_cov_2.034826_g8351_i0 | PRJNA380660 | 8751 | 230 | 2.034826 | 4.6800998 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 265 | 2.42e-66 | NTclustered | gi|2214231626|gb|OM622299.1| | 3003959 | g8351 | i0 | 97.419 | 1.34782608695652 | 155 | 4 | 67 | 0 | 1 | 155 | 3807 | 3653 | MAG: Picornavirales sp. isolate HPLV-44 genomic sequence | blastn | 310 | 265 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 | ||||
| 16979566 | 16979566 | PRJNA380660_P_NODE_12774_length_153_cov_1.943548_g12374_i0 | PRJNA380660 | 12774 | 153 | 1.943548 | 2.97362844 | Totivirus sp. | 2776824 | Viruses | Viruses | 272 | 8.84e-69 | NTclustered | gi|1918615616|gb|MT949667.1| | 2776824 | g12374 | i0 | 98.693 | 1.99346405228758 | 153 | 2 | 100 | 0 | 1 | 153 | 1259 | 1107 | Totivirus sp. isolate sequence_5835 genomic sequence | blastn | 305 | 272 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Totivirus sp. | ||
| 19528063 | 19528063 | PRJNA380660_P_NODE_11976_length_169_cov_2.300000_g11576_i0 | PRJNA380660 | 11976 | 169 | 2.3 | 3.887 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 207 | 2.85e-49 | NTclustered | gi|2059905452|tpg|BK041391.1| | 2832643 | g11576 | i0 | 88.757 | 1 | 169 | 19 | 100 | 0 | 1 | 169 | 13542 | 13710 | MAG TPA_asm: Caudoviricetes sp. isolate ct2M34, partial genome | blastn | 169 | 207 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 27169596 | 27169596 | PRJNA380660_P_NODE_12562_length_157_cov_2.062500_g12162_i0 | PRJNA380660 | 12562 | 157 | 2.0625 | 3.238125 | Rosellinia necatrix partitivirus 21 | 2699389 | Viruses | Viruses | 72.8 | 2.94e-13 | NR | BBU59850.1 | 2699389 | g12162 | i0 | 64.2 | 1.01273885350318 | 53 | 17 | 99.4 | 2 | 1 | 156 | 168 | 219 | BBU59850.1 RNA dependent RNA polymerase [Rosellinia necatrix partitivirus 21] | diamond | 159 | 72.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Rosellinia necatrix partitivirus 21 | |||
| 27233056 | 27233056 | PRJNA380660_P_NODE_2563_length_527_cov_2.078313_g2201_i0 | PRJNA380660 | 2563 | 527 | 2.078313 | 10.95270951 | Macrophomina phaseolina single-stranded RNA virus 1 | 1708488 | Viruses | Viruses | 86.7 | 4.1e-16 | NR | YP_010799203.1 | 1708488 | g2201 | i0 | 32.3 | 0.916508538899431 | 161 | 107 | 91.7 | 1 | 526 | 44 | 1337 | 1495 | YP_010799203.1 RNA-dependent RNA polymerase [Macrophomina phaseolina single-stranded RNA virus 1] | diamond | 483 | 86.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Fusariviridae | Alphafusarivirus | Alphafusarivirus macrophominae | ||
| 27264734 | 27264734 | PRJNA380660_P_NODE_2603_length_521_cov_6.250000_g2241_i0 | PRJNA380660 | 2603 | 521 | 6.25 | 32.5625 | Sanya totivirus 3 | 2905262 | Viruses | Viruses | 117 | 4.990000000000001e-27 | NR | UHK03125.1 | 2905262 | g2241 | i0 | 39.4 | 0.978886756238004 | 170 | 99 | 96.2 | 3 | 506 | 6 | 281 | 449 | UHK03125.1 MAG: RNA-dependent RNA polymerase [Sanya totivirus 3] | diamond | 510 | 117 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Sanya totivirus 3 | ||
| 27296281 | 27296281 | PRJNA380660_P_NODE_5403_length_336_cov_1.775244_g5004_i0 | PRJNA380660 | 5403 | 336 | 1.775244 | 5.96481984 | Aspergillus chevalieri partitivirus 1 | 3238293 | Viruses | Viruses | 87 | 3.08e-17 | NR | BFP29929.1 | 3238293 | g5004 | i0 | 50 | 0.732142857142857 | 82 | 41 | 73.2 | 0 | 333 | 88 | 451 | 532 | BFP29929.1 MAG: coat protein [Aspergillus chevalieri partitivirus 1] | diamond | 246 | 87 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Aspergillus chevalieri partitivirus 1 | |||
| 27485849 | 27485849 | PRJNA380660_P_NODE_2523_length_532_cov_3.467197_g2163_i0 | PRJNA380660 | 2523 | 532 | 3.467197 | 18.44548804 | Emiliania huxleyi virus 86 | 181082 | Viruses | Viruses | 77.8 | 4.41e-13 | NR | YP_293932.1 | 181082 | g2163 | i0 | 36.7 | 0.721804511278195 | 128 | 74 | 72.2 | 2 | 532 | 149 | 367 | 487 | YP_293932.1 Major Facilitator Superfamily protein [Emiliania huxleyi virus 86] | diamond | 384 | 77.8 | 1 | Viruses | Bamfordvirae | Nucleocytoviricota | Megaviricetes | Algavirales | Phycodnaviridae | Coccolithovirus | Coccolithovirus huxleyi | ||
| 27643906 | 27643906 | PRJNA380660_P_NODE_11144_length_187_cov_1.316456_g10744_i0 | PRJNA380660 | 11144 | 187 | 1.316456 | 2.46177272 | Prasiola crispa toti-like virus | 2933125 | Viruses | Viruses | 44.7 | 0.0038 | NR | CAI5383883.1 | 2933125 | g10744 | i0 | 42 | 0.802139037433155 | 50 | 29 | 80.2 | 0 | 154 | 5 | 112 | 161 | CAI5383883.1 RNA-dependent RNA polymerase [Prasiola crispa toti-like virus] | diamond | 150 | 44.7 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Prasiola crispa toti-like virus | |||
| 28369821 | 28369821 | PRJNA380660_P_NODE_1426_length_716_cov_5.687045_g1126_i0 | PRJNA380660 | 1426 | 716 | 5.687045 | 40.7192422 | Emiliania huxleyi virus 86 | 181082 | Viruses | Viruses | 104 | 1.3e-21 | NR | YP_293932.1 | 181082 | g1126 | i0 | 37 | 1.29050279329609 | 154 | 90 | 64.5 | 2 | 716 | 255 | 326 | 472 | YP_293932.1 Major Facilitator Superfamily protein [Emiliania huxleyi virus 86] | diamond | 924 | 104 | 1 | Viruses | Bamfordvirae | Nucleocytoviricota | Megaviricetes | Algavirales | Phycodnaviridae | Coccolithovirus | Coccolithovirus huxleyi | ||
| 28906447 | 28906447 | PRJNA380660_P_NODE_368_length_1412_cov_5.903109_g256_i0 | PRJNA380660 | 368 | 1412 | 5.903109 | 83.35189908 | Cryptolin alternavirus 1 | 3081027 | Viruses | Viruses | 163 | 4.92e-39 | NR | WOC29231.1 | 3081027 | g256 | i0 | 29.9 | 1.95679886685552 | 428 | 281 | 87.1 | 5 | 1373 | 144 | 1977 | 2403 | WOC29231.1 hypothetical protein [Cryptolin alternavirus 1] | diamond | 2763 | 163 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Alternaviridae | Alternavirus | Cryptolin alternavirus 1 | ||
| 29190916 | 29190916 | PRJNA380660_P_NODE_1189_length_795_cov_4.468668_g918_i0 | PRJNA380660 | 1189 | 795 | 4.468668 | 35.5259106 | Trichoderma citrinoviride partitivirus 1 | 2501046 | Viruses | Viruses | 210 | 1.72e-59 | NR | AZT88593.1 | 2501046 | g918 | i0 | 47.7 | 0.886792452830189 | 235 | 117 | 86.4 | 1 | 687 | 1 | 1 | 235 | AZT88593.1 coat protein [Trichoderma citrinoviride partitivirus 1] | diamond | 705 | 210 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Trichoderma citrinoviride partitivirus 1 | |||
| 29790515 | 29790515 | PRJNA380660_P_NODE_8431_length_237_cov_4.394231_g8031_i0 | PRJNA380660 | 8431 | 237 | 4.3942310000000004 | 10.41432747 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 137 | 1.26e-35 | NR | XCM67829.1 | 3003959 | g8031 | i0 | 78.2 | 0.987341772151899 | 78 | 17 | 98.7 | 0 | 3 | 236 | 415 | 492 | XCM67829.1 MAG: structural polyprotein [Picornavirales sp.] | diamond | 234 | 137 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 | ||||
| 30422975 | 30422975 | PRJNA380660_P_NODE_11933_length_170_cov_2.482270_g11533_i0 | PRJNA380660 | 11933 | 170 | 2.48227 | 4.219859 | Sanxia picorna-like virus 7 | 1923376 | Viruses | Viruses | 80.9 | 5.03e-16 | NR | APG77477.1 | 1923376 | g11533 | i0 | 70.2 | 1.00588235294118 | 57 | 16 | 98.8 | 1 | 3 | 170 | 327 | 383 | APG77477.1 hypothetical protein, partial [Sanxia picorna-like virus 7] | diamond | 171 | 80.9 | 1 | Viruses | Sanxia picorna-like virus 7 | ||||||||
| 30485809 | 30485809 | PRJNA380660_P_NODE_12893_length_151_cov_1.754098_g12493_i0 | PRJNA380660 | 12893 | 151 | 1.754098 | 2.64868798 | Ripaglac virus | 3130411 | Viruses | Viruses | 57 | 9.46e-8 | NR | WZH59599.1 | 3130411 | g12493 | i0 | 61.1 | 0.71523178807947 | 36 | 14 | 71.5 | 0 | 110 | 3 | 27 | 62 | WZH59599.1 MAG: RNA-dependent RNA polymerase [Ripaglac virus] | diamond | 108 | 57 | 1 | Viruses | Orthornavirae | Lenarviricota | Howeltoviricetes | Cryppavirales | Mitoviridae | Ripaglac virus | |||
| 30706852 | 30706852 | PRJNA380660_P_NODE_14_length_4015_cov_7.299047_g11_i0 | PRJNA380660 | 14 | 4015 | 7.299047 | 293.05673705 | Prasiola crispa toti-like virus | 2933125 | Viruses | Viruses | 70.9 | 5.09e-8 | NR | CAI5383882.1 | 2933125 | g11 | i0 | 25.9 | 0.153175591531756 | 205 | 119 | 13.5 | 6 | 1146 | 1688 | 464 | 659 | CAI5383882.1 putative capsid protein [Prasiola crispa toti-like virus] | diamond | 615 | 70.9 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Prasiola crispa toti-like virus | |||
| 31402421 | 31402421 | PRJNA380660_P_NODE_5156_length_346_cov_3.539432_g4758_i0 | PRJNA380660 | 5156 | 346 | 3.539432 | 12.24643472 | Sclerotinia sclerotiorum partitivirus 1 | 1232468 | Viruses | Viruses | 131 | 7.06e-33 | NR | AFR78160.1 | 1232468 | g4758 | i0 | 56.6 | 0.979768786127168 | 113 | 49 | 98 | 0 | 340 | 2 | 18 | 130 | AFR78160.1 RNA-dependent RNA polymerase [Sclerotinia sclerotiorum partitivirus 1] | diamond | 339 | 131 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Sclerotinia sclerotiorum partitivirus 1 | |||
| 31497283 | 31497283 | PRJNA380660_P_NODE_4696_length_368_cov_4.938053_g4299_i0 | PRJNA380660 | 4696 | 368 | 4.938053 | 18.17203504 | Leptosphaeria biglobosa partitivirus 3 | 3062775 | Viruses | Viruses | 89.4 | 7.05e-18 | NR | WKR37728.1 | 3062775 | g4299 | i0 | 53.8 | 0.758152173913043 | 93 | 42 | 75 | 1 | 78 | 353 | 4 | 96 | WKR37728.1 putative RNA-dependent RNA polymerase, partial [Leptosphaeria biglobosa partitivirus 3] | diamond | 279 | 89.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Leptosphaeria biglobosa partitivirus 3 | |||
| 31798606 | 31798606 | PRJNA380660_P_NODE_8477_length_236_cov_4.748792_g8077_i0 | PRJNA380660 | 8477 | 236 | 4.748792 | 11.20714912 | Viruses | 10239 | Viruses | Viruses | 144 | 2.95e-39 | NR | WAK75580.1 | 1955170 | g8077 | i0 | 87.2 | 2.97457627118644 | 78 | 10 | 99.2 | 0 | 3 | 236 | 191 | 268 | WAK75580.1 MAG: putative RNA-dependent RNA polymerase, partial [Partitiviridae sp.] | diamond | 702 | 144 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Partitiviridae sp. | |||
| 32034905 | 32034905 | PRJNA380660_P_NODE_7258_length_269_cov_2.554167_g6858_i0 | PRJNA380660 | 7258 | 269 | 2.554167 | 6.87070923 | Betapolyomavirus macacae | 1891767 | Viruses | Viruses | 62.8 | 4.44e-9 | NR | AAK29054.1 | 1891767 | g6858 | i0 | 70.5 | 0.490706319702602 | 44 | 13 | 49.1 | 0 | 96 | 227 | 494 | 537 | AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] | diamond | 132 | 62.8 | 1 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Sepolyvirales | Polyomaviridae | Betapolyomavirus | Betapolyomavirus macacae | ||
| 32256735 | 32256735 | PRJNA380660_P_NODE_5638_length_326_cov_3.444444_g5239_i0 | PRJNA380660 | 5638 | 326 | 3.444444 | 11.22888744 | Betapolyomavirus macacae | 1891767 | Viruses | Viruses | 48.1 | 0.00121 | NR | AAK29054.1 | 1891767 | g5239 | i0 | 74.2 | 0.680981595092024 | 31 | 8 | 28.5 | 0 | 144 | 52 | 507 | 537 | AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] | diamond | 222 | 48.5 | 0.991752577319588 | Viruses | Shotokuvirae | Cossaviricota | Papovaviricetes | Sepolyvirales | Polyomaviridae | Betapolyomavirus | Betapolyomavirus macacae | ||
| 32382905 | 32382905 | PRJNA380660_P_NODE_6719_length_287_cov_1.934109_g6319_i0 | PRJNA380660 | 6719 | 287 | 1.934109 | 5.5508928299999996 | Pterostylis sanguinea virus A | 1964430 | Viruses | Viruses | 55.5 | 2.18e-6 | NR | AOX47548.1 | 1964430 | g6319 | i0 | 57.8 | 0.470383275261324 | 45 | 19 | 47 | 0 | 149 | 15 | 910 | 954 | AOX47548.1 RNA-dependent RNA polymerase, partial [Pterostylis sanguinea virus A] | diamond | 135 | 55.5 | 1 | Viruses | Pterostylis sanguinea virus A |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;