RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA380660" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA380660 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32034905 32034905 PRJNA380660_P_NODE_7258_length_269_cov_2.554167_g6858_i0 PRJNA380660 7258 269 2.554167 6.87070923 Betapolyomavirus macacae 1891767 Viruses Viruses 62.8 4.44e-9   NR AAK29054.1 1891767 g6858 i0 70.5 0.490706319702602 44 13 49.1 0 96 227 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 62.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32256735 32256735 PRJNA380660_P_NODE_5638_length_326_cov_3.444444_g5239_i0 PRJNA380660 5638 326 3.444444 11.22888744 Betapolyomavirus macacae 1891767 Viruses Viruses 48.1 0.00121   NR AAK29054.1 1891767 g5239 i0 74.2 0.680981595092024 31 8 28.5 0 144 52 507 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 222 48.5 0.991752577319588 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;