RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA380660", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA380660 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16376707 16376707 PRJNA380660_P_NODE_173_length_1962_cov_3.129850_g125_i0 PRJNA380660 173 1962 3.12985 61.407657 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 278 1.09e-81   NR XP_027043473.1 46731 g125 i0 49.2 1.97400611620795 323 144 48 9 942 1 8 319 XP_027043473.1 protein disulfide-isomerase 2-like [Pocillopora damicornis] diamond 3873 278 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
28022718 28022718 PRJNA380660_P_NODE_4205_length_396_cov_2.901907_g3810_i0 PRJNA380660 4205 396 2.901907 11.49155172 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 53.1 4.65e-5   NR KXJ25352.1 2652724 g3810 i0 34.5 1.71212121212121 113 68 84.8 2 342 7 110 217 KXJ25352.1 Lactadherin [Exaiptasia diaphana] diamond 678 53.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
30959753 30959753 PRJNA380660_P_NODE_4854_length_361_cov_2.912651_g4456_i0 PRJNA380660 4854 361 2.912651 10.51467011 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 63.2 9.88e-9   NR XP_066914400.1 252671 g4456 i0 49.1 1.8781163434903 53 27 44 0 198 356 16 68 XP_066914400.1 uncharacterized protein [Clytia hemisphaerica] diamond 678 63.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;