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contig_metadata

5 rows where bioproject = "PRJNA380660", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA380660 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4902189 4902189 PRJNA380660_P_NODE_8404_length_238_cov_2.531100_g8004_i0 PRJNA380660 8404 238 2.5311 6.024018 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 298 2.4899999999999998e-76   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8004 i0 99.39 82.2268907563025 164 1 69 0 75 238 3417 3254 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 19570 298 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5505917 5505917 PRJNA380660_P_NODE_3505_length_438_cov_9.442543_g3118_i0 PRJNA380660 3505 438 9.442543 41.35833834 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 785 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3118 i0 99.087 56.3287671232877 438 2 99 2 2 438 1673 2109 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 24672 785 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8726935 8726935 PRJNA380660_P_NODE_1547_length_679_cov_18.016923_g1237_i0 PRJNA380660 1547 679 18.016923 122.33490717 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 732 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g1237 i0 99.02 101.081001472754 408 4 100 0 1 408 1036 629 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 68634 737 0.993215739484396 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14430976 14430976 PRJNA380660_P_NODE_1412_length_718_cov_17.856313_g1114_i0 PRJNA380660 1412 718 17.856313 128.20832734 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 1195 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1114 i0 97.179 56.6768802228412 709 17 98 3 1 707 26 733 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 40694 1195 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14430994 14430994 PRJNA380660_P_NODE_5912_length_315_cov_29.332168_g5513_i0 PRJNA380660 5912 315 29.332168 92.3963292 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 560 3.96e-155   NTclustered gi|238617602|gb|FJ973377.1| 188950 g5513 i0 98.73 100.228571428571 315 4 100 0 1 315 26 340 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 31572 560 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;