RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA380660", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA380660 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10002360 10002360 PRJNA380660_P_NODE_7508_length_262_cov_2.618026_g7108_i0 PRJNA380660 7508 262 2.618026 6.85922812 Philodinidae 44580 Rotifera other_Eukaryota 479 9.249999999999999e-131   NTclustered gi|72153665|gb|DQ089732.1| 338910 g7108 i0 99.618 100.003816793893 262 1 100 0 1 262 683 944 Anomopus telphusae 18S ribosomal RNA gene, complete sequence blastn 26201 479 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Anomopus Anomopus telphusae
14430967 14430967 PRJNA380660_P_NODE_10772_length_194_cov_1.600000_g10372_i0 PRJNA380660 10772 194 1.6 3.104 Trichotria tetractis 360708 Rotifera other_Eukaryota 163 7.41e-36   NTclustered gi|83285213|gb|DQ297760.1| 360708 g10372 i0 83.152 3.94845360824742 184 26 93 5 14 194 347 528 Trichotria tetractis 28S ribosomal RNA gene, partial sequence blastn 766 163 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Trichotriidae Trichotria Trichotria tetractis
15704946 15704946 PRJNA380660_P_NODE_1873_length_620_cov_6.155668_g1545_i0 PRJNA380660 1873 620 6.155668 38.1651416 Philodina citrina 468664 Rotifera other_Eukaryota 532 1.7999999999999994e-146   NTclustered gi|407227484|emb|FR856884.1| 468664 g1545 i0 85.283 25.5645161290323 530 63 85 13 2 526 2393 1874 Philodina citrina complete mitochondrial genome blastn 15850 532 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
22078739 22078739 PRJNA380660_P_NODE_12078_length_167_cov_1.913043_g11678_i0 PRJNA380660 12078 167 1.913043 3.19478181 Adineta vaga 104782 Rotifera other_Eukaryota 134 4.86e-27   NTclustered gi|402761755|gb|JX184009.1| 104782 g11678 i0 81.212 1.36526946107784 165 31 99 0 1 165 520 356 Adineta vaga cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 228 134 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
30345334 30345334 PRJNA380660_P_NODE_7832_length_252_cov_3.165919_g7432_i0 PRJNA380660 7832 252 3.165919 7.97811588 Adineta 104781 Rotifera other_Eukaryota 52.4 7.77e-7   NR UJR16599.1 104782 g7432 i0 58.1 0.869047619047619 43 18 51.2 0 207 79 1 43 UJR16599.1 hypothetical protein I4U23_003499 [Adineta vaga] diamond 219 52.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
32161648 32161648 PRJNA380660_P_NODE_6838_length_283_cov_1.696850_g6438_i0 PRJNA380660 6838 283 1.69685 4.8020855 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 95.1 9.56e-21   NR CAF0925001.1 1234261 g6438 i0 47.2 0.943462897526502 89 47 94.3 0 16 282 138 226 CAF0925001.1 unnamed protein product [Didymodactylos carnosus] diamond 267 95.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
32573017 32573017 PRJNA380660_P_NODE_5379_length_337_cov_1.740260_g4980_i0 PRJNA380660 5379 337 1.74026 5.8646762 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 63.5 5.72e-9   NR CAF4960535.1 2762511 g4980 i0 36.3 4.54005934718101 102 59 85.5 1 50 337 793 894 CAF4960535.1 unnamed protein product [Rotaria sp. Silwood1] diamond 1530 63.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;