RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA380660", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA380660 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7452200 7452200 PRJNA380660_P_NODE_4886_length_359_cov_12.557576_g4488_i0 PRJNA380660 4886 359 12.557576 45.08169784 Naididae 2109251 Annelida Annelida 520 7.759999999999998e-143   NTclustered gi|94467817|gb|DQ459965.1| 74735 g4488 i0 92.758 99.9470752089136 359 26 100 0 1 359 382 24 Rhyacodrilus falciformis 18S ribosomal RNA gene, partial sequence blastn 35881 520 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Rhyacodrilus Rhyacodrilus falciformis
8055516 8055516 PRJNA380660_P_NODE_5667_length_325_cov_3.719595_g5268_i0 PRJNA380660 5667 325 3.719595 12.08868375 Claudrilus corderoi 3262671 Annelida Annelida 91.6 6.47e-14   NTclustered gi|923872644|gb|KJ451231.1| 3262671 g5268 i0 91.045 15.8953846153846 67 6 21 0 243 309 195 261 Claudrilus corderoi 28S ribosomal RNA gene, partial sequence blastn 5166 91.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Protodrilidae Claudrilus Claudrilus corderoi
19528088 19528088 PRJNA380660_P_NODE_4256_length_393_cov_3.250000_g3861_i0 PRJNA380660 4256 393 3.25 12.7725 Hirudo verbana 311461 Annelida Annelida 60.2 2.25e-4   NTclustered gi|2918369710|emb|OZ237789.1| 311461 g3861 i0 100 2 32 0 9 0 305 336 1760047 1760016 Hirudo verbana genome assembly, chromosome: 11 blastn 786 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
22078735 22078735 PRJNA380660_P_NODE_11238_length_184_cov_5.122581_g10838_i0 PRJNA380660 11238 184 5.122581 9.42554904 Paranais litoralis 74742 Annelida Annelida 274 3.0799999999999997e-69   NTclustered gi|1494622622|gb|MK076421.1| 74742 g10838 i0 94.022 100.527173913043 184 6 100 1 1 184 1658 1480 Paranais litoralis isolate PARliHBMD large subunit ribosomal RNA gene, partial sequence blastn 18497 274 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Paranais Paranais litoralis
25300445 25300445 PRJNA380660_P_NODE_3760_length_422_cov_3.114504_g3371_i0 PRJNA380660 3760 422 3.114504 13.14320688 Pristina 150439 Annelida Annelida 778 0   NTclustered gi|285029397|gb|GQ355415.1| 212339 g3371 i0 100 98.1184834123223 421 0 99 0 2 422 428 8 Pristina aequiseta 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 41406 778 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina aequiseta
30074867 30074867 PRJNA380660_P_NODE_792_length_982_cov_2.668416_g587_i0 PRJNA380660 792 982 2.668416 26.20384512 Owenia fusiformis 6347 Annelida Annelida 166 4.609999999999999e-43   NR CAH1794753.1 6347 g587 i0 40.3 4.11812627291242 226 110 67.2 8 5 664 265 471 CAH1794753.1 unnamed protein product, partial [Owenia fusiformis] diamond 4044 166 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;