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contig_metadata

13 rows where bioproject = "PRJNA380660" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJNA380660 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
402247 402247 PRJNA380660_P_NODE_11481_length_180_cov_1.622517_g11081_i0 PRJNA380660 11481 180 1.622517 2.9205306 Neobodo designis 312471 Euglenozoa other_Eukaryota 305 1.06e-78   NTclustered gi|77994645|gb|DQ207583.1| 312471 g11081 i0 97.222 96.8722222222222 180 5 100 0 1 180 1293 1114 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 17437 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
1074284 1074284 PRJNA380660_P_NODE_5341_length_338_cov_3.809061_g4942_i0 PRJNA380660 5341 338 3.809061 12.87462618 Naegleria 5761 Heterolobosea other_Eukaryota 614 3.2499999999999993e-171   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4942 i0 99.41 21.1804733727811 339 1 100 1 1 338 3996 3658 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7159 614 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9330338 9330338 PRJNA380660_P_NODE_7608_length_259_cov_2.104348_g7208_i0 PRJNA380660 7608 259 2.104348 5.45026132 Neobodo designis 312471 Euglenozoa other_Eukaryota 379 9.529999999999998e-101   NTclustered gi|225216795|gb|FJ176710.1| 312471 g7208 i0 98.165 178.262548262548 218 2 100 1 1 216 1129 912 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 46170 379 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
11277452 11277452 PRJNA380660_P_NODE_8349_length_239_cov_3.042857_g7949_i0 PRJNA380660 8349 239 3.042857 7.27242823 Trypanosoma 5690 Euglenozoa other_Eukaryota 377 3.12e-100   NTclustered gi|1714016877|gb|MN244156.1| 67003 g7949 i0 95.021 163.192468619247 241 10 100 2 1 239 806 566 Trypanosoma theileri isolate TBC15 large subunit ribosomal RNA gene, partial sequence blastn 39003 377 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
11277454 11277454 PRJNA380660_P_NODE_9329_length_219_cov_2.047368_g8929_i0 PRJNA380660 9329 219 2.047368 4.48373592 Naegleria 5761 Heterolobosea other_Eukaryota 364 2.19e-96   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g8929 i0 99.5 10.958904109589 200 1 91 0 10 209 4343 4144 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 2400 364 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
11880955 11880955 PRJNA380660_P_NODE_7530_length_262_cov_1.154506_g7130_i0 PRJNA380660 7530 262 1.154506 3.02480572 Euglena tristella 161227 Euglenozoa other_Eukaryota 259 1.31e-64   NTclustered gi|209362331|gb|DQ140109.2| 161227 g7130 i0 94.767 2.99618320610687 172 0 99 1 1 163 359 188 Euglena tristella isolate New Jersey large subunit ribosomal RNA gene, partial sequence blastn 785 259 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena tristella
18925716 18925716 PRJNA380660_P_NODE_4395_length_385_cov_3.384831_g3999_i0 PRJNA380660 4395 385 3.384831 13.03159935 Naegleria 5761 Heterolobosea other_Eukaryota 702 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g3999 i0 99.739 65.3038961038961 383 1 99 0 1 383 3415 3033 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 25142 708 0.991525423728814 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18925724 18925724 PRJNA380660_P_NODE_7495_length_263_cov_1.858974_g7095_i0 PRJNA380660 7495 263 1.858974 4.88910162 Naegleria 5761 Heterolobosea other_Eukaryota 143 1.38e-29   NTclustered gi|2618963742|gb|OR769034.1| 5762 g7095 i0 87.805 27.148288973384 123 14 47 1 132 254 5057 5178 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7140 143 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24025995 24025995 PRJNA380660_P_NODE_1299_length_755_cov_9.033058_g1018_i0 PRJNA380660 1299 755 9.033058 68.1995879 Naegleria 5761 Heterolobosea other_Eukaryota 771 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g1018 i0 99.762 98.594701986755 420 1 100 0 1 420 1835 1416 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 74439 771 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
26790286 26790286 PRJNA380660_P_NODE_4581_length_375_cov_3.046243_g4184_i0 PRJNA380660 4581 375 3.046243 11.42341125 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 77.4 1.2e-13   NR XP_002671276.1 5762 g4184 i0 48.4 1.008 126 60 99.2 4 374 3 10 132 XP_002671276.1 uncharacterized protein NAEGRDRAFT_53059 [Naegleria gruberi] diamond 378 77.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28180226 28180226 PRJNA380660_P_NODE_10286_length_202_cov_2.427746_g9886_i0 PRJNA380660 10286 202 2.427746 4.90404692 Euglena gracilis 3039 Euglenozoa other_Eukaryota 47.8 3.54e-4   NR BAR45479.1 3039 g9886 i0 36.1 1.73762376237624 61 39 90.6 0 185 3 46 106 BAR45479.1 endo-1,3-beta-glucanase [Euglena gracilis] diamond 351 47.8 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
30345333 30345333 PRJNA380660_P_NODE_3972_length_409_cov_2.460526_g3579_i0 PRJNA380660 3972 409 2.460526 10.06355134 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 94 3.07e-19   NR TPP41689.1 5661 g3579 i0 92.2 29.1711491442543 51 4 37.4 0 408 256 1340 1390 TPP41689.1 EF hand family protein [Leishmania donovani] diamond 11931 94 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
32558445 32558445 PRJNA380660_P_NODE_11139_length_187_cov_1.626582_g10739_i0 PRJNA380660 11139 187 1.626582 3.04170834 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84 2.05e-17   NR XP_044544572.1 51637 g10739 i0 58.1 5.96791443850267 62 26 99.5 0 187 2 233 294 XP_044544572.1 uncharacterized protein C9374_010021 [Naegleria lovaniensis] diamond 1116 84.7 0.991735537190083 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;