RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA380416" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8055248 8055248 PRJNA380416_P_NODE_12007_length_165_cov_1.318966_g11860_i0 PRJNA380416 12007 165 1.318966 2.1762939 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 305 9.59e-79   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g11860 i0 100 69.9090909090909 165 0 100 0 1 165 449 613 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 11535 305 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
19527856 19527856 PRJNA380416_P_NODE_13636_length_162_cov_0.893805_g13489_i0 PRJNA380416 13636 162 0.893805 1.4479641 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 300 4.36e-77   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g13489 i0 100 97.9197530864197 162 0 100 0 1 162 1042 1203 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 15863 300 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;