RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA380416" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16979367 16979367 PRJNA380416_P_NODE_1454_length_508_cov_2.858388_g1310_i0 PRJNA380416 1454 508 2.858388 14.52061104 Chytridiomycetes 451435 Fungi Fungi 193 2e-60   NR KAI8920797.1 109895 g1310 i0 79.7 6.21850393700787 118 24 69.7 0 507 154 7 124 KAI8920797.1 ribosomal protein S27a, partial [Powellomyces hirtus] diamond 3159 193 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
31197452 31197452 PRJNA380416_P_NODE_11515_length_166_cov_2.863248_g11368_i0 PRJNA380416 11515 166 2.863248 4.75299168 Chytriomyces 109882 Fungi Fungi 89.7 1.36e-20   NR TPX69010.1 246404 g11368 i0 72.7 3.97590361445783 55 15 99.4 0 166 2 62 116 TPX69010.1 hypothetical protein CcCBS67573_g06961 [Chytriomyces confervae] diamond 660 89.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces confervae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;