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contig_metadata

687 rows where bioproject = "PRJNA380416" and tax_phylum = "Chordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chordata · 687 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380416 · 687 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
402040 402040 PRJNA380416_P_NODE_11441_length_167_cov_0.864407_g11294_i0 PRJNA380416 11441 167 0.864407 1.44355969 Bos taurus 9913 Chordata Chordata 309 7.53e-80   NTclustered gi|2587621432|ref|XM_059889577.1| 9913 g11294 i0 100 73.4850299401198 167 0 100 0 1 167 637 803 PREDICTED: Bos taurus MORC family CW-type zinc finger 3 (MORC3), transcript variant X2, mRNA blastn 12272 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
402049 402049 PRJNA380416_P_NODE_13741_length_161_cov_0.910714_g13594_i0 PRJNA380416 13741 161 0.910714 1.46624954 Bos taurus 9913 Chordata Chordata 298 1.56e-76   NTclustered gi|1391895251|ref|NM_001205818.2| 9913 g13594 i0 100 21.1304347826087 161 0 100 0 1 161 1508 1668 Bos taurus alpha-L-fucosidase 2 (FUCA2), mRNA blastn 3402 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
402050 402050 PRJNA380416_P_NODE_1901_length_442_cov_2.646310_g1754_i0 PRJNA380416 1901 442 2.64631 11.6966902 Bos taurus 9913 Chordata Chordata 601 3.3799999999999993e-167   NTclustered gi|439|emb|X62916.1| 9913 g1754 i0 98.813 68.0904977375566 337 4 76 0 1 337 748 412 B.taurus mRNA for immunoglobulin G1 heavy chain blastn 30096 601 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
402055 402055 PRJNA380416_P_NODE_3901_length_302_cov_0.948617_g3754_i0 PRJNA380416 3901 302 0.948617 2.86482334 Bos taurus 9913 Chordata Chordata 553 6.32e-153   NTclustered gi|2587673332|ref|XM_059882947.1| 9913 g3754 i0 99.669 92.5397350993377 302 1 100 0 1 302 955 654 PREDICTED: Bos taurus tetraspanin 32 (TSPAN32), transcript variant X3, mRNA blastn 27947 553 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
402057 402057 PRJNA380416_P_NODE_6821_length_220_cov_0.894737_g6674_i0 PRJNA380416 6821 220 0.894737 1.9684214 Bos taurus 9913 Chordata Chordata 407 3.61e-109   NTclustered gi|2587630679|ref|XM_025000354.2| 9913 g6674 i0 100 102.295454545455 220 0 100 0 1 220 2342 2123 PREDICTED: Bos taurus RANBP2-type and C3HC4-type zinc finger containing 1 (RBCK1), transcript variant X2, mRNA blastn 22505 407 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
402058 402058 PRJNA380416_P_NODE_8781_length_192_cov_1.804196_g8634_i0 PRJNA380416 8781 192 1.804196 3.46405632 Bos taurus 9913 Chordata Chordata 355 1.13e-93   NTclustered gi|2587648251|ref|XR_009491420.1| 9913 g8634 i0 100 29.890625 192 0 100 0 1 192 10172 10363 PREDICTED: Bos taurus uncharacterized lncRNA (LOC100847120), transcript variant X12, ncRNA blastn 5739 355 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
402059 402059 PRJNA380416_P_NODE_9781_length_182_cov_1.187970_g9634_i0 PRJNA380416 9781 182 1.18797 2.1621054 Bos indicus 9915 Chordata Chordata 315 1.79e-81   NTclustered gi|2878538144|ref|XM_070792653.1| 9915 g9634 i0 97.802 604.989010989011 182 4 100 0 1 182 12385 12566 PREDICTED: Bos indicus adhesion G protein-coupled receptor E2-like (LOC139184057), transcript variant X3, mRNA blastn 110108 315 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
1074142 1074142 PRJNA380416_P_NODE_10261_length_177_cov_1.195312_g10114_i0 PRJNA380416 10261 177 1.195312 2.11570224 Bos 9903 Chordata Chordata 309 8.04e-80   NTclustered gi|2633782515|ref|XM_061387932.1| 9906 g10114 i0 98.305 19.954802259887 177 2 100 1 1 177 1499 1324 PREDICTED: Bos javanicus integral membrane protein 2C (ITM2C), mRNA blastn 3532 311 0.993569131832797 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074144 1074144 PRJNA380416_P_NODE_10821_length_171_cov_1.254098_g10674_i0 PRJNA380416 10821 171 1.254098 2.14450758 Bos 9903 Chordata Chordata 316 4.6e-82   NTclustered gi|2633815843|ref|XM_061402346.1| 9906 g10674 i0 100 99.8070175438596 171 0 100 0 1 171 1088 918 PREDICTED: Bos javanicus eukaryotic translation initiation factor 3 subunit B (EIF3B), transcript variant X2, mRNA blastn 17067 316 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074145 1074145 PRJNA380416_P_NODE_11041_length_168_cov_3.243697_g10894_i0 PRJNA380416 11041 168 3.243697 5.44941096 Bos 9903 Chordata Chordata 311 2.11e-80   NTclustered gi|2633837302|ref|XM_061405940.1| 9906 g10894 i0 100 67.9702380952381 168 0 100 0 1 168 246 79 PREDICTED: Bos javanicus S100 calcium binding protein A9 (S100A9), transcript variant X1, mRNA blastn 11419 311 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074147 1074147 PRJNA380416_P_NODE_11581_length_166_cov_1.307692_g11434_i0 PRJNA380416 11581 166 1.307692 2.17076872 Bovidae 9895 Chordata Chordata 248 1.65e-61   NTclustered gi|2633696159|ref|XM_061430439.1| 9906 g11434 i0 99.27 82.5301204819277 137 1 83 0 30 166 949 1085 PREDICTED: Bos javanicus apoptotic chromatin condensation inducer 1 (ACIN1), transcript variant X8, mRNA blastn 13700 248 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074149 1074149 PRJNA380416_P_NODE_11761_length_166_cov_0.871795_g11614_i0 PRJNA380416 11761 166 0.871795 1.4471797 Bovidae 9895 Chordata Chordata 307 2.69e-79   NTclustered gi|2633718166|ref|XM_061436664.1| 9906 g11614 i0 100 69.2469879518072 166 0 100 0 1 166 1107 1272 PREDICTED: Bos javanicus adipose secreted signaling protein (ADISSP), transcript variant X1, mRNA blastn 11495 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074150 1074150 PRJNA380416_P_NODE_12521_length_164_cov_0.886957_g12374_i0 PRJNA380416 12521 164 0.886957 1.45460948 Bovidae 9895 Chordata Chordata 86.1 1.35e-12   NTclustered gi|182406777|gb|EU553919.1| 9901 g12374 i0 96.154 10.0731707317073 52 2 32 0 113 164 2091 2142 Bison bison CD18 (CD18) mRNA, complete cds blastn 1652 86.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bison Bison bison
1074152 1074152 PRJNA380416_P_NODE_12901_length_163_cov_1.342105_g12754_i0 PRJNA380416 12901 163 1.342105 2.18763115 Bos 9903 Chordata Chordata 302 1.22e-77   NTclustered gi|2633885826|ref|XM_061422714.1| 9906 g12754 i0 100 14.9263803680982 163 0 100 0 1 163 10261 10099 PREDICTED: Bos javanicus sphingosine-1-phosphate receptor 4 (S1PR4), mRNA blastn 2433 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074156 1074156 PRJNA380416_P_NODE_13781_length_161_cov_0.910714_g13634_i0 PRJNA380416 13781 161 0.910714 1.46624954 Bovidae 9895 Chordata Chordata 298 1.56e-76   NTclustered gi|2633916219|ref|XM_061410059.1| 9906 g13634 i0 100 100.478260869565 161 0 100 0 1 161 1133 973 PREDICTED: Bos javanicus transcription factor binding to IGHM enhancer 3 (TFE3), transcript variant X3, mRNA blastn 16177 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074157 1074157 PRJNA380416_P_NODE_13861_length_161_cov_0.910714_g13714_i0 PRJNA380416 13861 161 0.910714 1.46624954 Bovidae 9895 Chordata Chordata 287 3.37e-73   NTclustered gi|2633854790|ref|XM_061414423.1| 9906 g13714 i0 98.758 99.5217391304348 161 2 100 0 1 161 2483 2323 PREDICTED: Bos javanicus myosin IG (MYO1G), transcript variant X2, mRNA blastn 16023 287 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074159 1074159 PRJNA380416_P_NODE_13961_length_161_cov_0.910714_g13814_i0 PRJNA380416 13961 161 0.910714 1.46624954 Bos 9903 Chordata Chordata 298 1.56e-76   NTclustered gi|2587642418|ref|XM_059876348.1| 9913 g13814 i0 100 14.639751552795 161 0 100 0 1 161 3942 4102 PREDICTED: Bos taurus huntingtin interacting protein 1 related (HIP1R), transcript variant X2, mRNA blastn 2357 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074162 1074162 PRJNA380416_P_NODE_3881_length_303_cov_1.204724_g3734_i0 PRJNA380416 3881 303 1.204724 3.65031372 Bos 9903 Chordata Chordata 560 3.79e-155   NTclustered gi|2587636072|ref|XM_059874671.1| 9913 g3734 i0 100 99.2739273927393 303 0 100 0 1 303 2222 2524 PREDICTED: Bos taurus Rho GTPase activating protein 1 (ARHGAP1), transcript variant X4, mRNA blastn 30080 560 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074163 1074163 PRJNA380416_P_NODE_4041_length_296_cov_1.587045_g3894_i0 PRJNA380416 4041 296 1.587045 4.6976532 Bos 9903 Chordata Chordata 542 1.34e-149   NTclustered gi|2862388798|ref|NM_001099712.2| 9913 g3894 i0 99.662 21.2297297297297 296 1 100 0 1 296 1039 1334 Bos taurus GTPase, IMAP family member 6 (GIMAP6), mRNA blastn 6284 542 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074164 1074164 PRJNA380416_P_NODE_4461_length_279_cov_0.978261_g4314_i0 PRJNA380416 4461 279 0.978261 2.72934819 Bos 9903 Chordata Chordata 516 7.58e-142   NTclustered gi|75832100|ref|NM_001014382.2| 9913 g4314 i0 100 32.0501792114695 279 0 100 0 1 279 1438 1716 Bos taurus MYD88 innate immune signal transduction adaptor (MYD88), mRNA blastn 8942 516 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074165 1074165 PRJNA380416_P_NODE_5061_length_258_cov_3.430622_g4914_i0 PRJNA380416 5061 258 3.430622 8.85100476 root 1 Root_unresolved Root_unresolved 477 3.2699999999999985e-130   NTclustered gi|2633801148|ref|XM_061397602.1| 9906 g4914 i0 100 97.9031007751938 258 0 100 0 1 258 386 643 PREDICTED: Bos javanicus glutathione peroxidase 1 (GPX1), mRNA blastn 25259 477 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074167 1074167 PRJNA380416_P_NODE_6361_length_228_cov_1.117318_g6214_i0 PRJNA380416 6361 228 1.117318 2.54748504 Bovidae 9895 Chordata Chordata 311 3.0400000000000003e-80   NTclustered gi|375126577|gb|JN792885.1| 9913 g6214 i0 100 93.6710526315789 168 0 74 0 1 168 808 975 Bos taurus MHC class I antigen (BoLA-NC) gene, BoLA-NC1*00501 allele, partial cds blastn 21357 311 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074168 1074168 PRJNA380416_P_NODE_7201_length_214_cov_0.927273_g7054_i0 PRJNA380416 7201 214 0.927273 1.98436422 Bovidae 9895 Chordata Chordata 390 3.519999999999999e-104   NTclustered gi|148223120|ref|NM_001098039.1| 9913 g7054 i0 99.533 99.9158878504673 214 1 100 0 1 214 1604 1817 Bos taurus SH2 domain containing 3C (SH2D3C), mRNA blastn 21382 390 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074169 1074169 PRJNA380416_P_NODE_7261_length_213_cov_1.146341_g7114_i0 PRJNA380416 7261 213 1.146341 2.44170633 Bos 9903 Chordata Chordata 394 2.7e-105   NTclustered gi|2878357866|ref|XM_019968297.2| 9915 g7114 i0 100 16.1549295774648 213 0 100 0 1 213 136 348 PREDICTED: Bos indicus fat storage inducing transmembrane protein 1 (FITM1), transcript variant X1, mRNA blastn 3441 394 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
1074170 1074170 PRJNA380416_P_NODE_7661_length_207_cov_1.189873_g7514_i0 PRJNA380416 7661 207 1.189873 2.46303711 Bos 9903 Chordata Chordata 377 2.63e-100   NTclustered gi|2633880984|ref|XM_061421667.1| 9906 g7514 i0 99.517 100 207 1 100 0 1 207 7367 7161 PREDICTED: Bos javanicus myosin IXB (MYO9B), transcript variant X15, mRNA blastn 20700 377 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074172 1074172 PRJNA380416_P_NODE_8181_length_200_cov_1.006623_g8034_i0 PRJNA380416 8181 200 1.006623 2.013246 Bos 9903 Chordata Chordata 370 4.22e-98   NTclustered gi|2633754917|ref|XM_061387074.1| 9906 g8034 i0 100 46.405 200 0 100 0 1 200 1407 1606 PREDICTED: Bos javanicus charged multivesicular body protein 1A (CHMP1A), transcript variant X1, mRNA blastn 9281 370 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1074176 1074176 PRJNA380416_P_NODE_9261_length_187_cov_1.847826_g9114_i0 PRJNA380416 9261 187 1.847826 3.45543462 Bos 9903 Chordata Chordata 346 6.56e-91   NTclustered gi|118150983|ref|NM_001077943.1| 9913 g9114 i0 100 96.5080213903743 187 0 100 0 1 187 2892 2706 Bos taurus extended synaptotagmin 1 (ESYT1), mRNA blastn 18047 346 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074177 1074177 PRJNA380416_P_NODE_9281_length_187_cov_1.478261_g9134_i0 PRJNA380416 9281 187 1.478261 2.76434807 Bos 9903 Chordata Chordata 346 6.56e-91   NTclustered gi|154425546|gb|BC151609.1| 9913 g9134 i0 100 56.6363636363636 187 0 100 0 1 187 4396 4210 Bos taurus inositol polyphosphate-5-phosphatase, 145kDa, mRNA (cDNA clone MGC:157261 IMAGE:7988832), complete cds blastn 10591 346 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1074178 1074178 PRJNA380416_P_NODE_9421_length_186_cov_0.970803_g9274_i0 PRJNA380416 9421 186 0.970803 1.80569358 Bos 9903 Chordata Chordata 333 5.069999999999999e-87   NTclustered gi|115496485|ref|NM_001075716.1| 9913 g9274 i0 98.925 100.693548387097 186 2 100 0 1 186 2784 2599 Bos taurus HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 (HPS1), mRNA blastn 18729 333 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676758 1676758 PRJNA380416_P_NODE_1142_length_578_cov_1.829868_g1004_i0 PRJNA380416 1142 578 1.829868 10.57663704 Bos taurus 9913 Chordata Chordata 1062 0   NTclustered gi|24496447|gb|AY145128.1| 9913 g1004 i0 99.827 25.2301038062284 578 1 100 0 1 578 819 1396 Bos taurus immunoglobulin M heavy chain secretory form mRNA, complete cds blastn 14583 1062 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676759 1676759 PRJNA380416_P_NODE_11482_length_167_cov_0.864407_g11335_i0 PRJNA380416 11482 167 0.864407 1.44355969 Bos taurus 9913 Chordata Chordata 309 7.53e-80   NTclustered gi|2587648230|ref|XM_005219119.5| 9913 g11335 i0 100 35.688622754491 167 0 100 0 1 167 869 1035 PREDICTED: Bos taurus uncharacterized protein (LOC100848419), transcript variant X2, mRNA blastn 5960 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676760 1676760 PRJNA380416_P_NODE_12182_length_165_cov_0.879310_g12035_i0 PRJNA380416 12182 165 0.87931 1.4508615 Bos taurus 9913 Chordata Chordata 305 9.59e-79   NTclustered gi|2587667688|ref|XM_024985432.2| 9913 g12035 i0 100 74.1212121212121 165 0 100 0 1 165 8359 8195 PREDICTED: Bos taurus polycystin 1, transient receptor potential channel interacting (PKD1), transcript variant X2, mRNA blastn 12230 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676761 1676761 PRJNA380416_P_NODE_12262_length_165_cov_0.879310_g12115_i0 PRJNA380416 12262 165 0.87931 1.4508615 Bos taurus 9913 Chordata Chordata 305 9.59e-79   NTclustered gi|61553105|gb|BT021504.1| 9913 g12115 i0 100 45.5939393939394 165 0 100 0 1 165 1707 1543 Bos taurus sulfide quinone reductase-like (yeast) (SQRDL), mRNA, complete cds blastn 7523 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676765 1676765 PRJNA380416_P_NODE_12782_length_164_cov_0.886957_g12635_i0 PRJNA380416 12782 164 0.886957 1.45460948 Monodelphis domestica 13616 Chordata Chordata 52.8 0.014   NTclustered gi|2514343018|ref|XM_007506943.3| 13616 g12635 i0 100 1.02439024390244 28 0 17 0 4 31 4274 4247 PREDICTED: Monodelphis domestica StAR related lipid transfer domain containing 8 (STARD8), transcript variant X1, mRNA blastn 168 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Didelphimorphia Didelphidae Monodelphis Monodelphis domestica
1676769 1676769 PRJNA380416_P_NODE_14002_length_161_cov_0.910714_g13855_i0 PRJNA380416 14002 161 0.910714 1.46624954 Bos indicus x Bos taurus 30522 Chordata Chordata 292 7.24e-75   NTclustered gi|1542870369|ref|XM_027554861.1| 30522 g13855 i0 99.379 99.9068322981366 161 1 100 0 1 161 712 872 PREDICTED: Bos indicus x Bos taurus deoxyguanosine kinase (DGUOK), transcript variant X1, mRNA blastn 16085 292 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
1676770 1676770 PRJNA380416_P_NODE_14022_length_161_cov_0.910714_g13875_i0 PRJNA380416 14022 161 0.910714 1.46624954 Bos taurus 9913 Chordata Chordata 298 1.56e-76   NTclustered gi|402746781|ref|NM_001081724.2| 9913 g13875 i0 100 27.9875776397516 161 0 100 0 1 161 525 685 Bos taurus interferon induced transmembrane protein 5 (IFITM5), mRNA blastn 4506 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676774 1676774 PRJNA380416_P_NODE_5022_length_260_cov_0.966825_g4875_i0 PRJNA380416 5022 260 0.966825 2.513745 Bos taurus 9913 Chordata Chordata 481 2.55e-131   NTclustered gi|50872219|gb|AC149665.2| 9913 g4875 i0 100 100.803846153846 260 0 100 0 1 260 78476 78217 Bos taurus BAC CH240-60O13 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 26209 481 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676777 1676777 PRJNA380416_P_NODE_5962_length_236_cov_1.620321_g5815_i0 PRJNA380416 5962 236 1.620321 3.82395756 Bos taurus 9913 Chordata Chordata 431 2.33e-116   NTclustered gi|2587687589|ref|XM_059887561.1| 9913 g5815 i0 99.576 28.0805084745763 236 1 100 0 1 236 2565 2800 PREDICTED: Bos taurus WD repeat domain 1 (WDR1), transcript variant X2, mRNA blastn 6627 431 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
1676782 1676782 PRJNA380416_P_NODE_7502_length_209_cov_1.275000_g7355_i0 PRJNA380416 7502 209 1.275 2.66475 Bos indicus x Bos taurus 30522 Chordata Chordata 307 3.54e-79   NTclustered gi|1542933133|ref|XM_027530373.1| 30522 g7355 i0 98.837 87.4545454545455 172 2 92 0 38 209 2606 2435 PREDICTED: Bos indicus x Bos taurus prosaposin (PSAP), transcript variant X3, mRNA blastn 18278 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
1676785 1676785 PRJNA380416_P_NODE_8662_length_194_cov_1.055172_g8515_i0 PRJNA380416 8662 194 1.055172 2.04703368 Bos indicus x Bos taurus 30522 Chordata Chordata 359 8.809999999999999e-95   NTclustered gi|1542919917|ref|XM_027523770.1| 30522 g8515 i0 100 43.5567010309278 194 0 100 0 1 194 2622 2429 PREDICTED: Bos indicus x Bos taurus C-X3-C motif chemokine receptor 1 (CX3CR1), transcript variant X3, mRNA blastn 8450 359 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
1676786 1676786 PRJNA380416_P_NODE_8902_length_191_cov_1.288732_g8755_i0 PRJNA380416 8902 191 1.288732 2.46147812 Bos taurus 9913 Chordata Chordata 353 4.02e-93   NTclustered gi|2587649546|ref|XM_005220836.3| 9913 g8755 i0 100 33.130890052356 191 0 100 0 1 191 1196 1006 PREDICTED: Bos taurus LIM domain containing 2 (LIMD2), transcript variant X1, mRNA blastn 6328 353 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349424 2349424 PRJNA380416_P_NODE_10062_length_179_cov_1.346154_g9915_i0 PRJNA380416 10062 179 1.346154 2.40961566 Bos 9903 Chordata Chordata 326 8.09e-85   NTclustered gi|2878457869|ref|XM_019983211.2| 9915 g9915 i0 99.441 17.0167597765363 179 1 100 0 1 179 6248 6426 PREDICTED: Bos indicus KLF transcription factor 13 (KLF13), mRNA blastn 3046 326 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
2349425 2349425 PRJNA380416_P_NODE_10262_length_177_cov_1.195312_g10115_i0 PRJNA380416 10262 177 1.195312 2.11570224 Bos 9903 Chordata Chordata 327 2.2199999999999996e-85   NTclustered gi|330688483|ref|NM_001191397.1| 9913 g10115 i0 100 92.7457627118644 177 0 100 0 1 177 1533 1357 Bos taurus DALR anticodon binding domain containing 3 (DALRD3), mRNA blastn 16416 327 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349426 2349426 PRJNA380416_P_NODE_10722_length_172_cov_1.455285_g10575_i0 PRJNA380416 10722 172 1.455285 2.5030902 Bos 9903 Chordata Chordata 313 5.989999999999998e-81   NTclustered gi|2587674271|ref|XM_059883148.1| 9913 g10575 i0 99.419 2.93023255813953 172 1 100 0 1 172 4787 4958 PREDICTED: Bos taurus interferon-induced transmembrane protein 1 (LOC613699), mRNA blastn 504 313 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349428 2349428 PRJNA380416_P_NODE_11822_length_166_cov_0.871795_g11675_i0 PRJNA380416 11822 166 0.871795 1.4471797 Bos 9903 Chordata Chordata 307 2.69e-79   NTclustered gi|151556072|gb|BC150024.1| 9913 g11675 i0 100 38.9156626506024 166 0 100 0 1 166 1157 992 Bos taurus cDNA clone IMAGE:8456555 blastn 6460 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349433 2349433 PRJNA380416_P_NODE_12842_length_163_cov_2.192982_g12695_i0 PRJNA380416 12842 163 2.192982 3.57456066 Bos 9903 Chordata Chordata 302 1.22e-77   NTclustered gi|1040566755|gb|KT723008.1| 9913 g12695 i0 100 66.5889570552147 163 0 100 0 1 163 652034 652196 Bos taurus immunoglobulin heavy chain region, genomic sequence and partial cds blastn 10854 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349434 2349434 PRJNA380416_P_NODE_13162_length_163_cov_0.894737_g13015_i0 PRJNA380416 13162 163 0.894737 1.45842131 Bovidae 9895 Chordata Chordata 302 1.22e-77   NTclustered gi|2633760248|ref|XM_061388662.1| 9906 g13015 i0 100 100 163 0 100 0 1 163 893 731 PREDICTED: Bos javanicus ERCC excision repair 1, endonuclease non-catalytic subunit (ERCC1), transcript variant X1, mRNA blastn 16300 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2349435 2349435 PRJNA380416_P_NODE_13502_length_162_cov_0.902655_g13355_i0 PRJNA380416 13502 162 0.902655 1.4623011 Bos 9903 Chordata Chordata 300 4.36e-77   NTclustered gi|62911998|gb|AY944236.1| 9913 g13355 i0 100 97.7716049382716 162 0 100 0 1 162 153710 153549 Bos taurus prion preproprotein (PRNP) and prion-like protein doppel preproprotein (PRND) genes, complete cds; and RASSF2 gene, complete sequence blastn 15839 300 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349436 2349436 PRJNA380416_P_NODE_13562_length_162_cov_0.902655_g13415_i0 PRJNA380416 13562 162 0.902655 1.4623011 Bos 9903 Chordata Chordata 300 4.36e-77   NTclustered gi|2633915234|ref|XM_061409734.1| 9906 g13415 i0 100 47.8950617283951 162 0 100 0 1 162 957 796 PREDICTED: Bos javanicus C-X-C motif chemokine receptor 3 (CXCR3), mRNA blastn 7759 300 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2349437 2349437 PRJNA380416_P_NODE_13802_length_161_cov_0.910714_g13655_i0 PRJNA380416 13802 161 0.910714 1.46624954 Bos 9903 Chordata Chordata 298 1.56e-76   NTclustered gi|2587639321|ref|XM_010813373.4| 9913 g13655 i0 100 80.5155279503106 161 0 100 0 1 161 5866 5706 PREDICTED: Bos taurus torsin 1A interacting protein 2 (TOR1AIP2), transcript variant X1, mRNA blastn 12963 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349438 2349438 PRJNA380416_P_NODE_1882_length_445_cov_1.512626_g1735_i0 PRJNA380416 1882 445 1.512626 6.7311857 Bos 9903 Chordata Chordata 817 0   NTclustered gi|2633885522|ref|XM_061422643.1| 9906 g1735 i0 99.775 100.880898876405 445 1 100 0 1 445 2978 2534 PREDICTED: Bos javanicus eukaryotic translation elongation factor 2 (EEF2), mRNA blastn 44892 817 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2349442 2349442 PRJNA380416_P_NODE_5442_length_249_cov_1.515000_g5295_i0 PRJNA380416 5442 249 1.515 3.77235 Bos 9903 Chordata Chordata 459 1.1399999999999998e-124   NTclustered gi|2633837940|ref|XM_061407547.1| 9906 g5295 i0 100 59.0963855421687 248 0 99 0 1 248 1305 1552 PREDICTED: Bos javanicus CDC42 small effector 1 (CDC42SE1), transcript variant X1, mRNA blastn 14715 460 0.997826086956522 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2349444 2349444 PRJNA380416_P_NODE_5922_length_237_cov_1.468085_g5775_i0 PRJNA380416 5922 237 1.468085 3.47936145 Bovidae 9895 Chordata Chordata 438 1.4e-118   NTclustered gi|2587683617|ref|XM_005207179.5| 9913 g5775 i0 100 97.3417721518987 237 0 100 0 1 237 1892 1656 PREDICTED: Bos taurus TAP binding protein like (TAPBPL), transcript variant X1, mRNA blastn 23070 438 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349445 2349445 PRJNA380416_P_NODE_6022_length_235_cov_0.919355_g5875_i0 PRJNA380416 6022 235 0.919355 2.16048425 Bos 9903 Chordata Chordata 429 8.33e-116   NTclustered gi|2633826389|ref|XM_061405832.1| 9906 g5875 i0 99.574 53.5148936170213 235 1 100 0 1 235 4212 3978 PREDICTED: Bos javanicus SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 (SPOCK2), mRNA blastn 12576 429 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2349446 2349446 PRJNA380416_P_NODE_6062_length_234_cov_1.102703_g5915_i0 PRJNA380416 6062 234 1.102703 2.58032502 Bos 9903 Chordata Chordata 433 6.41e-117   NTclustered gi|78042489|ref|NM_001035012.1| 9913 g5915 i0 100 99.5811965811966 234 0 100 0 1 234 632 865 Bos taurus receptor interacting serine/threonine kinase 1 (RIPK1), mRNA blastn 23302 433 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349447 2349447 PRJNA380416_P_NODE_6482_length_226_cov_0.898305_g6335_i0 PRJNA380416 6482 226 0.898305 2.0301693 Bovidae 9895 Chordata Chordata 401 1.7299999999999993e-107   NTclustered gi|312836859|gb|AC242830.4| 9913 g6335 i0 98.673 100.146017699115 226 3 100 0 1 226 110366 110591 Bos taurus Y Chr BAC CH240-240K20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 22633 401 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349449 2349449 PRJNA380416_P_NODE_6622_length_223_cov_1.454023_g6475_i0 PRJNA380416 6622 223 1.454023 3.24247129 Bos 9903 Chordata Chordata 407 3.67e-109   NTclustered gi|74355021|gb|BC102616.1| 9913 g6475 i0 99.552 34.914798206278 223 1 100 0 1 223 902 1124 Bos taurus ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1, mRNA (cDNA clone MGC:128022 IMAGE:30957891), complete cds blastn 7786 407 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349450 2349450 PRJNA380416_P_NODE_702_length_748_cov_2.394850_g590_i0 PRJNA380416 702 748 2.39485 17.913478 Bos 9903 Chordata Chordata 1382 0   NTclustered gi|381342543|gb|JQ437479.1| 9909 g590 i0 100 100 748 0 100 0 1 748 9747 9000 Bos primigenius mitochondrion, complete genome blastn 74800 1382 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos primigenius
2349451 2349451 PRJNA380416_P_NODE_8362_length_197_cov_2.067568_g8215_i0 PRJNA380416 8362 197 2.067568 4.07310896 Bos 9903 Chordata Chordata 364 1.929999999999999e-96   NTclustered gi|2587649829|ref|XM_005221040.5| 9913 g8215 i0 100 61.8477157360406 197 0 100 0 1 197 1038 842 PREDICTED: Bos taurus MAPK regulated corepressor interacting protein 1 (MCRIP1), transcript variant X2, mRNA blastn 12184 364 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349452 2349452 PRJNA380416_P_NODE_8502_length_196_cov_1.006803_g8355_i0 PRJNA380416 8502 196 1.006803 1.97333388 Bovidae 9895 Chordata Chordata 363 6.899999999999998e-96   NTclustered gi|2633755262|ref|XM_061387169.1| 9906 g8355 i0 100 100 196 0 100 0 1 196 672 867 PREDICTED: Bos javanicus CYLD lysine 63 deubiquitinase (CYLD), transcript variant X4, mRNA blastn 19600 363 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2349454 2349454 PRJNA380416_P_NODE_9482_length_185_cov_1.441176_g9335_i0 PRJNA380416 9482 185 1.441176 2.6661756 Bos 9903 Chordata Chordata 337 3.89e-88   NTclustered gi|58760347|gb|AY911316.1| 9913 g9335 i0 99.459 72.5783783783784 185 1 100 0 1 185 205 21 Bos taurus clone IMAGE:7961455 proteoglycan 1 precursor-like mRNA, complete cds blastn 13427 337 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2349456 2349456 PRJNA380416_P_NODE_9762_length_182_cov_1.533835_g9615_i0 PRJNA380416 9762 182 1.533835 2.7915797 Bos 9903 Chordata Chordata 337 3.82e-88   NTclustered gi|312836859|gb|AC242830.4| 9913 g9615 i0 100 31.3076923076923 182 0 100 0 1 182 94629 94448 Bos taurus Y Chr BAC CH240-240K20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 5698 337 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2952633 2952633 PRJNA380416_P_NODE_11023_length_169_cov_1.058333_g10876_i0 PRJNA380416 11023 169 1.058333 1.78858277 Bos indicus x Bos taurus 30522 Chordata Chordata 307 2.73e-79   NTclustered gi|1542896999|ref|XM_027514661.1| 30522 g10876 i0 99.408 18.0236686390533 169 1 100 0 1 169 1468 1300 PREDICTED: Bos indicus x Bos taurus leukocyte immunoglobulin-like receptor subfamily B member 4 (LOC113875939), transcript variant X2, mRNA blastn 3046 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
2952640 2952640 PRJNA380416_P_NODE_12543_length_164_cov_0.886957_g12396_i0 PRJNA380416 12543 164 0.886957 1.45460948 Bos indicus 9915 Chordata Chordata 303 3.42e-78   NTclustered gi|2878538193|ref|XM_019963983.2| 9915 g12396 i0 100 12.8414634146341 164 0 100 0 1 164 660 497 PREDICTED: Bos indicus DExD-box helicase 39A (DDX39A), transcript variant X2, mRNA blastn 2106 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
2952641 2952641 PRJNA380416_P_NODE_12563_length_164_cov_0.886957_g12416_i0 PRJNA380416 12563 164 0.886957 1.45460948 Bos taurus 9913 Chordata Chordata 302 1.23e-77   NTclustered gi|109659364|gb|BC118126.1| 9913 g12416 i0 100 99.3231707317073 163 0 99 0 2 164 857 695 Bos taurus leupaxin, mRNA (cDNA clone MGC:140379 IMAGE:8188696), complete cds blastn 16289 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2952648 2952648 PRJNA380416_P_NODE_14003_length_161_cov_0.910714_g13856_i0 PRJNA380416 14003 161 0.910714 1.46624954 Bos taurus 9913 Chordata Chordata 298 1.56e-76   NTclustered gi|74268075|gb|BC102642.1| 9913 g13856 i0 100 30.6086956521739 161 0 100 0 1 161 2500 2660 Bos taurus aconitase 2, mitochondrial, mRNA (cDNA clone MGC:128048 IMAGE:7954643), complete cds blastn 4928 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2952649 2952649 PRJNA380416_P_NODE_1543_length_492_cov_2.878104_g1397_i0 PRJNA380416 1543 492 2.878104 14.16027168 Bos taurus 9913 Chordata Chordata 904 0   NTclustered gi|31343549|ref|NM_175797.2| 9913 g1397 i0 99.797 87.5182926829268 492 1 100 0 1 492 1097 606 Bos taurus Rho GDP dissociation inhibitor beta (ARHGDIB), mRNA blastn 43059 904 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2952651 2952651 PRJNA380416_P_NODE_3023_length_346_cov_1.373737_g2876_i0 PRJNA380416 3023 346 1.373737 4.75313002 Bos taurus 9913 Chordata Chordata 640 5.4999999999999996e-179   NTclustered gi|2529861258|ref|NM_001077866.2| 9913 g2876 i0 100 12.7052023121387 346 0 100 0 1 346 1639 1984 Bos taurus ribosomal protein L15 (RPL15), mRNA blastn 4396 640 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2952656 2952656 PRJNA380416_P_NODE_7043_length_216_cov_1.449102_g6896_i0 PRJNA380416 7043 216 1.449102 3.13006032 Bos taurus 9913 Chordata Chordata 399 5.909999999999999e-107   NTclustered gi|111306995|gb|BC119973.1| 9913 g6896 i0 100 40.4722222222222 216 0 100 0 1 216 862 647 Bos taurus T cell receptor, alpha, mRNA (cDNA clone MGC:139847 IMAGE:8283961), complete cds blastn 8742 399 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
2952658 2952658 PRJNA380416_P_NODE_8483_length_196_cov_1.251701_g8336_i0 PRJNA380416 8483 196 1.251701 2.45333396 Bos taurus 9913 Chordata Chordata 363 6.899999999999998e-96   NTclustered gi|2587626871|ref|XM_059891464.1| 9913 g8336 i0 100 15.0612244897959 196 0 100 0 1 196 2466 2271 PREDICTED: Bos taurus mediator complex subunit 22 (MED22), transcript variant X2, mRNA blastn 2952 363 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624857 3624857 PRJNA380416_P_NODE_10623_length_173_cov_1.645161_g10476_i0 PRJNA380416 10623 173 1.645161 2.84612853 Bovidae 9895 Chordata Chordata 320 3.61e-83   NTclustered gi|2633900762|ref|XM_061426217.1| 9906 g10476 i0 100 99.7109826589595 173 0 100 0 1 173 1239 1411 PREDICTED: Bos javanicus FYVE, RhoGEF and PH domain containing 3 (FGD3), transcript variant X5, mRNA blastn 17250 320 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624858 3624858 PRJNA380416_P_NODE_11343_length_167_cov_0.864407_g11196_i0 PRJNA380416 11343 167 0.864407 1.44355969 Bovidae 9895 Chordata Chordata 303 3.5e-78   NTclustered gi|2633869422|ref|XM_061418454.1| 9906 g11196 i0 99.401 95.0479041916168 167 1 100 0 1 167 1716 1882 PREDICTED: Bos javanicus SH3 domain binding protein 1 (SH3BP1), mRNA blastn 15873 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624859 3624859 PRJNA380416_P_NODE_11403_length_167_cov_0.864407_g11256_i0 PRJNA380416 11403 167 0.864407 1.44355969 Bos 9903 Chordata Chordata 298 1.63e-76   NTclustered gi|2633696335|ref|XR_009739057.1| 9906 g11256 i0 98.802 34.6646706586826 167 2 100 0 1 167 6760 6926 PREDICTED: Bos javanicus RRAD and GEM like GTPase 2 (REM2), transcript variant X2, misc_RNA blastn 5789 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624860 3624860 PRJNA380416_P_NODE_11863_length_166_cov_0.871795_g11716_i0 PRJNA380416 11863 166 0.871795 1.4471797 Bos 9903 Chordata Chordata 302 1.2500000000000001e-77   NTclustered gi|2587685824|ref|XM_005207096.5| 9913 g11716 i0 100 28.0722891566265 163 0 98 0 4 166 2318 2156 PREDICTED: Bos taurus LINE-1 retrotransposable element ORF2 protein (LOC617565), transcript variant X4, mRNA blastn 4660 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624862 3624862 PRJNA380416_P_NODE_12043_length_165_cov_0.879310_g11896_i0 PRJNA380416 12043 165 0.87931 1.4508615 Bos 9903 Chordata Chordata 305 9.59e-79   NTclustered gi|61553424|gb|BT021557.1| 9913 g11896 i0 100 97.369696969697 165 0 100 0 1 165 93 257 Bos taurus Williams Beuren syndrome chromosome region 22 (WBSCR22), mRNA, complete cds blastn 16066 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624863 3624863 PRJNA380416_P_NODE_12083_length_165_cov_0.879310_g11936_i0 PRJNA380416 12083 165 0.87931 1.4508615 Bos 9903 Chordata Chordata 305 9.59e-79   NTclustered gi|402743299|ref|NM_001077852.2| 9913 g11936 i0 100 96.7454545454545 165 0 100 0 1 165 1129 965 Bos taurus NHERF family PDZ scaffold protein 1 (NHERF1), mRNA blastn 15963 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624864 3624864 PRJNA380416_P_NODE_12183_length_165_cov_0.879310_g12036_i0 PRJNA380416 12183 165 0.87931 1.4508615 Bos 9903 Chordata Chordata 300 4.46e-77   NTclustered gi|2587625912|ref|XM_005212849.4| 9913 g12036 i0 99.394 77.0060606060606 165 1 100 0 1 165 3070 2906 PREDICTED: Bos taurus MAX dimerization protein 1 (MXD1), transcript variant X1, mRNA blastn 12706 300 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624865 3624865 PRJNA380416_P_NODE_12503_length_164_cov_0.886957_g12356_i0 PRJNA380416 12503 164 0.886957 1.45460948 Bovidae 9895 Chordata Chordata 298 1.59e-76   NTclustered gi|118151441|ref|NM_001078159.1| 9913 g12356 i0 99.39 92.0609756097561 164 1 100 0 1 164 1553 1390 Bos taurus lysozyme (LYZ), mRNA blastn 15098 298 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624866 3624866 PRJNA380416_P_NODE_12803_length_164_cov_0.860870_g12656_i0 PRJNA380416 12803 164 0.86087 1.4118268 Bovidae 9895 Chordata Chordata 303 3.42e-78   NTclustered gi|2633756550|ref|XM_061387538.1| 9906 g12656 i0 100 51.7317073170732 164 0 100 0 1 164 1796 1959 PREDICTED: Bos javanicus E2F transcription factor 4 (E2F4), transcript variant X1, mRNA blastn 8484 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624867 3624867 PRJNA380416_P_NODE_12983_length_163_cov_0.894737_g12836_i0 PRJNA380416 12983 163 0.894737 1.45842131 Bos 9903 Chordata Chordata 302 1.22e-77   NTclustered gi|2633868219|ref|XM_061418072.1| 9906 g12836 i0 100 38.8588957055215 163 0 100 0 1 163 866 1028 PREDICTED: Bos javanicus CD4 molecule (CD4), transcript variant X1, mRNA blastn 6334 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624869 3624869 PRJNA380416_P_NODE_13643_length_162_cov_0.876106_g13496_i0 PRJNA380416 13643 162 0.876106 1.41929172 Bovidae 9895 Chordata Chordata 257 2.66e-64   NTclustered gi|324959674|gb|AC243800.3| 9913 g13496 i0 100 30.5061728395062 139 0 86 0 1 139 129683 129545 Bos taurus Y Chr BAC CH240-119M16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 4942 257 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624874 3624874 PRJNA380416_P_NODE_1743_length_463_cov_2.041063_g1597_i0 PRJNA380416 1743 463 2.041063 9.45012169 Bovidae 9895 Chordata Chordata 854 0   NTclustered gi|2633846198|ref|XM_061412489.1| 9906 g1597 i0 100 99.6652267818575 462 0 99 0 2 463 2510 2971 PREDICTED: Bos javanicus colony stimulating factor 3 receptor (CSF3R), transcript variant X3, mRNA blastn 46145 854 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624875 3624875 PRJNA380416_P_NODE_1943_length_437_cov_1.989691_g1796_i0 PRJNA380416 1943 437 1.989691 8.69494967 Bos 9903 Chordata Chordata 802 0   NTclustered gi|5931941|gb|AF069133.1|AF069133 9913 g1796 i0 99.771 74.6453089244851 437 1 100 0 1 437 2144 1708 Bos taurus interferon-stimulated gene product 17/ubiquitin cross-reactive protein (ISG17/UCRP) gene, complete cds blastn 32620 802 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624876 3624876 PRJNA380416_P_NODE_1963_length_434_cov_1.597403_g1816_i0 PRJNA380416 1963 434 1.597403 6.93272902 Bos 9903 Chordata Chordata 797 0   NTclustered gi|148744155|gb|BC142411.1| 9913 g1816 i0 99.77 30.2926267281106 435 0 100 1 1 434 1314 1748 Bos taurus cDNA clone IMAGE:8436773, partial cds blastn 13147 797 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624877 3624877 PRJNA380416_P_NODE_4283_length_286_cov_1.291139_g4136_i0 PRJNA380416 4283 286 1.291139 3.69265754 Bos 9903 Chordata Chordata 529 1e-145   NTclustered gi|2633747530|ref|XM_061384922.1| 9906 g4136 i0 100 26.4965034965035 286 0 100 0 1 286 2509 2224 PREDICTED: Bos javanicus phospholipase B domain containing 2 (PLBD2), transcript variant X2, mRNA blastn 7578 529 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624878 3624878 PRJNA380416_P_NODE_6003_length_235_cov_1.645161_g5856_i0 PRJNA380416 6003 235 1.645161 3.86612835 Bos 9903 Chordata Chordata 435 1.79e-117   NTclustered gi|2633772324|ref|XM_061392078.1| 9906 g5856 i0 100 97.3659574468085 235 0 100 0 1 235 1108 1342 PREDICTED: Bos javanicus granulin precursor (GRN), mRNA blastn 22881 435 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624879 3624879 PRJNA380416_P_NODE_7063_length_216_cov_1.077844_g6916_i0 PRJNA380416 7063 216 1.077844 2.32814304 Bovidae 9895 Chordata Chordata 398 2.1299999999999996e-106   NTclustered gi|2633814498|ref|XM_061401879.1| 9906 g6916 i0 100 96.9166666666667 215 0 99 0 2 216 1691 1477 PREDICTED: Bos javanicus linker for activation of T cells family member 2 (LAT2), transcript variant X4, mRNA blastn 20934 398 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624880 3624880 PRJNA380416_P_NODE_7203_length_214_cov_0.927273_g7056_i0 PRJNA380416 7203 214 0.927273 1.98436422 Bos 9903 Chordata Chordata 390 3.519999999999999e-104   NTclustered gi|2587674130|ref|XM_005227248.3| 9913 g7056 i0 100 92.5233644859813 211 0 99 0 2 212 336 126 PREDICTED: Bos taurus glutathione S-transferase pi 1 (GSTP1), transcript variant X4, mRNA blastn 19800 390 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624881 3624881 PRJNA380416_P_NODE_7603_length_208_cov_0.955975_g7456_i0 PRJNA380416 7603 208 0.955975 1.988428 Bovidae 9895 Chordata Chordata 379 7.359999999999998e-101   NTclustered gi|2633719711|ref|XM_061437101.1| 9906 g7456 i0 99.519 100.264423076923 208 1 100 0 1 208 709 502 PREDICTED: Bos javanicus FKBP prolyl isomerase 1A (FKBP1A), transcript variant X1, mRNA blastn 20855 379 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624882 3624882 PRJNA380416_P_NODE_8043_length_201_cov_1.953947_g7896_i0 PRJNA380416 8043 201 1.953947 3.92743347 Bovidae 9895 Chordata Chordata 372 1.18e-98   NTclustered gi|114051579|ref|NM_001046070.1| 9913 g7896 i0 100 29.9701492537313 201 0 100 0 1 201 585 785 Bos taurus lymphocyte antigen 6 family member E (LY6E), mRNA blastn 6024 372 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
3624884 3624884 PRJNA380416_P_NODE_8843_length_192_cov_0.874126_g8696_i0 PRJNA380416 8843 192 0.874126 1.67832192 Bos 9903 Chordata Chordata 355 1.13e-93   NTclustered gi|2633833407|ref|XM_061407562.1| 9906 g8696 i0 100 99.90625 192 0 100 0 1 192 774 583 PREDICTED: Bos javanicus transaldolase 1 (TALDO1), mRNA blastn 19182 355 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3624885 3624885 PRJNA380416_P_NODE_9883_length_181_cov_1.159091_g9736_i0 PRJNA380416 9883 181 1.159091 2.09795471 Bos 9903 Chordata Chordata 335 1.36e-87   NTclustered gi|157279210|gb|BC134467.1| 9913 g9736 i0 100 54.8453038674033 181 0 100 0 1 181 747 927 Bos taurus interleukin 2 receptor, gamma (severe combined immunodeficiency), mRNA (cDNA clone MGC:140400 IMAGE:8189539), complete cds blastn 9927 335 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229176 4229176 PRJNA380416_P_NODE_10904_length_170_cov_1.264463_g10757_i0 PRJNA380416 10904 170 1.264463 2.1495871 Bos taurus 9913 Chordata Chordata 315 1.64e-81   NTclustered gi|1212984723|ref|NM_001193105.2| 9913 g10757 i0 100 23.2470588235294 170 0 100 0 1 170 274 105 Bos taurus transcobalamin 1 (TCN1), mRNA blastn 3952 315 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229178 4229178 PRJNA380416_P_NODE_12264_length_165_cov_0.879310_g12117_i0 PRJNA380416 12264 165 0.87931 1.4508615 Bos taurus 9913 Chordata Chordata 207 2.7800000000000002e-49   NTclustered gi|910266067|gb|KT005248.1| 9913 g12117 i0 96.063 102.484848484848 127 5 99 0 2 128 108143 108269 Bos taurus haplotype A14 tripartite motif containing 26 (TRIM26), MHC class I antigen 6*04001, MHC class I antigen 2*02501, MHC class I antigen 4*02401, and MHC class I antigen 1*02301 genes, complete cds; MHC class I antigen-like protein 6, MHC class I antigen-like protein 5, and MHC class I antigen-like protein 4 (pseudogene 4) pseudogenes, complete sequence; non-classical MHC class I antigen NC1*00601 gene, complete cds; and MHC class I antigen-like protein 7 pseudogene, complete sequence blastn 16910 207 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229182 4229182 PRJNA380416_P_NODE_13204_length_163_cov_0.885965_g13057_i0 PRJNA380416 13204 163 0.885965 1.44412295 Bos taurus 9913 Chordata Chordata 285 1.23e-72   NTclustered gi|2587688643|ref|XM_059887814.1| 9913 g13057 i0 98.171 1.00613496932515 164 2 100 1 1 163 4460 4623 PREDICTED: Bos taurus solute carrier family 2 member 9 (SLC2A9), transcript variant X9, mRNA blastn 164 285 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229191 4229191 PRJNA380416_P_NODE_3044_length_345_cov_1.695946_g2897_i0 PRJNA380416 3044 345 1.695946 5.8510137 Bos taurus 9913 Chordata Chordata 632 9.17e-177   NTclustered gi|94981785|gb|DQ497627.1| 9913 g2897 i0 99.71 80.7884057971014 345 1 100 0 1 345 373 29 Bos taurus clone P12 immunoglobulin heavy chain mRNA, partial cds blastn 27872 632 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229194 4229194 PRJNA380416_P_NODE_5564_length_246_cov_0.827411_g5417_i0 PRJNA380416 5564 246 0.827411 2.03543106 Bos taurus 9913 Chordata Chordata 370 5.399999999999999e-98   NTclustered gi|2587625071|ref|XR_236276.5| 9913 g5417 i0 94.239 216.113821138211 243 13 99 1 1 243 9919 10160 PREDICTED: Bos taurus uncharacterized lncRNA (LOC101901960), transcript variant X1, ncRNA blastn 53164 370 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229197 4229197 PRJNA380416_P_NODE_6344_length_228_cov_1.731844_g6197_i0 PRJNA380416 6344 228 1.731844 3.94860432 Bos taurus 9913 Chordata Chordata 420 4.84e-113   NTclustered gi|1040566755|gb|KT723008.1| 9913 g6197 i0 100 7.93859649122807 227 0 99 0 2 228 619025 618799 Bos taurus immunoglobulin heavy chain region, genomic sequence and partial cds blastn 1810 420 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229199 4229199 PRJNA380416_P_NODE_6584_length_224_cov_1.165714_g6437_i0 PRJNA380416 6584 224 1.165714 2.61119936 Bos taurus 9913 Chordata Chordata 414 2.1999999999999996e-111   NTclustered gi|61553151|gb|BT021511.1| 9913 g6437 i0 100 90.59375 224 0 100 0 1 224 595 818 Bos taurus Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA), mRNA, complete cds blastn 20293 414 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4229200 4229200 PRJNA380416_P_NODE_6844_length_219_cov_2.311765_g6697_i0 PRJNA380416 6844 219 2.311765 5.06276535 Bos taurus 9913 Chordata Chordata 405 1.29e-108   NTclustered gi|24496447|gb|AY145128.1| 9913 g6697 i0 100 49.5570776255708 219 0 100 0 1 219 1649 1431 Bos taurus immunoglobulin M heavy chain secretory form mRNA, complete cds blastn 10853 405 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;