RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA380416" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380416 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15704733 15704733 PRJNA380416_P_NODE_6053_length_234_cov_1.567568_g5906_i0 PRJNA380416 6053 234 1.567568 3.66810912 Membranipora membranacea 95170 Bryozoa other_Eukaryota 196 9.15e-46   NTclustered gi|2320635327|gb|ON868448.1| 95170 g5906 i0 86.517 10.8931623931624 178 24 76 0 1 178 314 137 Membranipora membranacea calmodulin-like protein 2 mRNA, complete cds blastn 2549 196 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;