RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA380416" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380416 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2349453 2349453 PRJNA380416_P_NODE_8582_length_195_cov_1.020548_g8435_i0 PRJNA380416 8582 195 1.020548 1.9900686 Ascomycota 4890 Fungi Fungi 361 2.46e-95   NTclustered gi|1338684535|gb|MG889595.1| 5061 g8435 i0 100 100 195 0 100 0 1 195 888 694 Aspergillus niger isolate soil small subunit ribosomal RNA gene, partial sequence blastn 19500 361 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
2952631 2952631 PRJNA380416_P_NODE_10263_length_177_cov_1.187500_g10116_i0 PRJNA380416 10263 177 1.1875 2.101875 Spathaspora passalidarum 340170 Fungi Fungi 119 1.45e-22   NTclustered gi|598072100|ref|XM_007376817.1| 619300 g10116 i0 87.037 30.2768361581921 108 10 60 4 72 177 57 162 Spathaspora passalidarum NRRL Y-27907 40S ribosomal protein S14-B (SPAPADRAFT_62713), mRNA blastn 5359 119 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Spathaspora Spathaspora passalidarum
5505679 5505679 PRJNA380416_P_NODE_6605_length_223_cov_3.195402_g6458_i0 PRJNA380416 6605 223 3.195402 7.12574646 Fusarium proliferatum 948311 Fungi Fungi 401 1.7099999999999992e-107   NTclustered gi|1206257034|emb|LT841250.1| 948311 g6458 i0 99.103 92.8071748878924 223 2 100 0 1 223 5528 5306 Fusarium proliferatum partial 18S rRNA gene for 18S ribosomal RNA, strain ITEM2287 blastn 20696 401 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium proliferatum
8726828 8726828 PRJNA380416_P_NODE_2607_length_374_cov_4.067692_g2460_i0 PRJNA380416 2607 374 4.067692 15.21316808 Ascomycota 4890 Fungi Fungi 689 0   NTclustered gi|18147209|dbj|AB053248.1| 52249 g2460 i0 100 101.700534759358 373 0 99 0 2 374 1084 712 Candida silvae gene for 18S rRNA, partial sequence blastn 38036 689 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Saturnispora Saturnispora silvae
13827566 13827566 PRJNA380416_P_NODE_11911_length_166_cov_0.871795_g11764_i0 PRJNA380416 11911 166 0.871795 1.4471797 Phaeosphaeriaceae 5020 Fungi Fungi 285 1.26e-72   NTclustered gi|154563029|gb|EF590320.2| 13684 g11764 i0 97.59 107 166 4 100 0 1 166 1281 1446 Phaeosphaeria nodorum strain S-80-603 large subunit ribosomal RNA gene, partial sequence blastn 17762 285 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Parastagonospora Parastagonospora nodorum
13827570 13827570 PRJNA380416_P_NODE_12631_length_164_cov_0.886957_g12484_i0 PRJNA380416 12631 164 0.886957 1.45460948 Podospora 5144 Fungi Fungi 52.8 0.014   NTclustered gi|2670686776|ref|XM_062880916.1| 2093777 g12484 i0 100 0.682926829268293 28 0 17 0 16 43 451 478 Podospora bellae-mahoneyi inositol polyphosphate kinase kcs1 (KCS1), mRNA blastn 112 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Podosporaceae Podospora Podospora bellae-mahoneyi
14430773 14430773 PRJNA380416_P_NODE_13092_length_163_cov_0.894737_g12945_i0 PRJNA380416 13092 163 0.894737 1.45842131 Exophiala oligosperma 215243 Fungi Fungi 185 1.28e-42   NTclustered gi|1022877233|ref|XM_016406092.1| 215243 g12945 i0 99.029 1.03067484662577 103 1 63 0 1 103 3012 2910 Exophiala oligosperma uncharacterized protein (PV06_05122), partial mRNA blastn 168 185 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala oligosperma
14430785 14430785 PRJNA380416_P_NODE_5632_length_244_cov_1.497436_g5485_i0 PRJNA380416 5632 244 1.497436 3.65374384 Sordaria macrospora 5147 Fungi Fungi 102 2.15e-17   NTclustered gi|2749654334|ref|XM_003344831.2| 5147 g5485 i0 95.312 9.07786885245902 64 3 26 0 117 180 598 535 Sordaria macrospora 60S ribosomal protein eL18 (SMAC4_06165), mRNA blastn 2215 102 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Sordariaceae Sordaria Sordaria macrospora
15704717 15704717 PRJNA380416_P_NODE_12153_length_165_cov_0.879310_g12006_i0 PRJNA380416 12153 165 0.87931 1.4508615 Candida parapsilosis 5480 Fungi Fungi 305 9.59e-79   NTclustered gi|1919684751|ref|XM_036807190.1| 5480 g12006 i0 100 8.00606060606061 165 0 100 0 1 165 380 544 Candida parapsilosis uncharacterized protein (CPAR2_601350), partial mRNA blastn 1321 305 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
15704729 15704729 PRJNA380416_P_NODE_2053_length_424_cov_2.994667_g1906_i0 PRJNA380416 2053 424 2.994667 12.69738808 Saturnispora silvae 52249 Fungi Fungi 778 0   NTclustered gi|156099828|gb|EF550353.1| 52249 g1906 i0 99.764 100.308962264151 424 1 100 0 1 424 1131 1554 Saturnispora silvae strain NRRL Y-6725 18S ribosomal RNA gene, partial sequence blastn 42531 778 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Saturnispora Saturnispora silvae
22078555 22078555 PRJNA380416_P_NODE_4998_length_260_cov_2.677725_g4851_i0 PRJNA380416 4998 260 2.677725 6.962085 Saturnispora silvae 52249 Fungi Fungi 455 1.55e-123   NTclustered gi|1208297526|ref|NG_055098.1| 52249 g4851 i0 99.598 116.234615384615 249 1 96 0 1 249 2850 3098 Saturnispora silvae NRRL Y-6725 28S rRNA, partial sequence; from TYPE material blastn 30221 455 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Saturnispora Saturnispora silvae
22750946 22750946 PRJNA380416_P_NODE_1838_length_450_cov_1.620948_g1691_i0 PRJNA380416 1838 450 1.620948 7.294266 Schizosaccharomyces 4895 Fungi Fungi 217 1.46e-51   NTclustered gi|2524387879|emb|OY101113.1| 4897 g1691 i0 80.634 18.5511111111111 284 52 63 3 12 295 2986913 2987193 Schizosaccharomyces japonicus genome assembly, chromosome: 3 blastn 8348 217 1 Eukaryota Opisthokonta Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetales Schizosaccharomycetaceae Schizosaccharomyces Schizosaccharomyces japonicus
22750958 22750958 PRJNA380416_P_NODE_9578_length_184_cov_1.437037_g9431_i0 PRJNA380416 9578 184 1.437037 2.64414808 Sordariomycetes 147550 Fungi Fungi 320 3.9e-83   NTclustered gi|2798605368|gb|PQ285334.1| 5127 g9431 i0 97.849 101.070652173913 186 2 100 1 1 184 280 95 Fusarium fujikuroi isolate PB33 large subunit ribosomal RNA gene, partial sequence blastn 18597 320 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium fujikuroi
26933816 26933816 PRJNA380416_P_NODE_11842_length_166_cov_0.871795_g11695_i0 PRJNA380416 11842 166 0.871795 1.4471797 Eukaryota 2759 Fungi Fungi 42 0.025   NR TKX22715.1 40998 g11695 i0 42 6.72289156626506 50 29 90.4 0 17 166 309 358 TKX22715.1 actin-related protein 2/3 complex subunit 1 [Elsinoe australis] diamond 1116 42.4 0.990566037735849 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Myriangiales Elsinoaceae Elsinoe Elsinoe australis
29853947 29853947 PRJNA380416_P_NODE_2571_length_378_cov_1.650456_g2424_i0 PRJNA380416 2571 378 1.650456 6.23872368 Friedmanniomyces endolithicus 329885 Fungi Fungi 219 1.77e-71   NR KAK0340137.1 329885 g2424 i0 100 0.888888888888889 112 0 88.9 0 35 370 1 112 KAK0340137.1 hypothetical protein LTR94_031749, partial [Friedmanniomyces endolithicus] diamond 336 219 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Friedmanniomyces Friedmanniomyces endolithicus
30770254 30770254 PRJNA380416_P_NODE_6674_length_222_cov_1.751445_g6527_i0 PRJNA380416 6674 222 1.751445 3.8882079 Friedmanniomyces endolithicus 329885 Fungi Fungi 105 1.05e-25   NR KAK0360406.1 329885 g6527 i0 71.6 1.09459459459459 81 15 98.6 1 219 1 55 135 KAK0360406.1 hypothetical protein LTR94_027428, partial [Friedmanniomyces endolithicus] diamond 243 105 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Friedmanniomyces Friedmanniomyces endolithicus
30991393 30991393 PRJNA380416_P_NODE_4654_length_272_cov_1.659193_g4507_i0 PRJNA380416 4654 272 1.659193 4.51300496 Friedmanniomyces endolithicus 329885 Fungi Fungi 125 3.37e-33   NR KAK0360406.1 329885 g4507 i0 95.2 0.694852941176471 63 3 69.5 0 271 83 191 253 KAK0360406.1 hypothetical protein LTR94_027428, partial [Friedmanniomyces endolithicus] diamond 189 125 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Friedmanniomyces Friedmanniomyces endolithicus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;