RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA380416", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27454428 27454428 PRJNA380416_P_NODE_4563_length_276_cov_0.885463_g4416_i0 PRJNA380416 4563 276 0.885463 2.44387788 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 65.5 5.4e-10   NR CAF0781384.1 1234261 g4416 i0 41.1 1.69565217391304 73 42 79.3 1 244 26 202 273 CAF0781384.1 unnamed protein product [Didymodactylos carnosus] diamond 468 65.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30959747 30959747 PRJNA380416_P_NODE_11494_length_167_cov_0.864407_g11347_i0 PRJNA380416 11494 167 0.864407 1.44355969 Adineta ricciae 249248 Rotifera other_Eukaryota 94.4 2.7600000000000002e-22   NR CAF1066595.1 249248 g11347 i0 78.8 6.53892215568862 52 11 93.4 0 158 3 136 187 CAF1066595.1 unnamed protein product [Adineta ricciae] diamond 1092 94.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;