RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA380416", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29050059 29050059 PRJNA380416_P_NODE_10068_length_179_cov_1.176923_g9921_i0 PRJNA380416 10068 179 1.176923 2.10669217 root 1 Root_unresolved Root_unresolved 44.7 0.00329   NR KAI8867800.1 304332 g9921 i0 40 2.58100558659218 50 29 82.1 1 166 20 77 126 KAI8867800.1 hypothetical protein GQ42DRAFT_50824 [Ramicandelaber brevisporus] diamond 462 44.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota   Ramicandelaberales Ramicandelaberaceae Ramicandelaber Ramicandelaber brevisporus
30896670 30896670 PRJNA380416_P_NODE_4454_length_279_cov_1.308696_g4307_i0 PRJNA380416 4454 279 1.308696 3.65126184 Furculomyces boomerangus 61424 Fungi Fungi 86.3 6.94e-19   NR PVU86898.1 61424 g4307 i0 41.9 2.97849462365591 93 54 100 0 279 1 71 163 PVU86898.1 hypothetical protein BB559_006328 [Furculomyces boomerangus] diamond 831 86.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Furculomyces Furculomyces boomerangus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;