RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA380416", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29285399 29285399 PRJNA380416_P_NODE_11249_length_167_cov_0.864407_g11102_i0 PRJNA380416 11249 167 0.864407 1.44355969 Caldilineaceae bacterium 2614250 Bacteria Bacteria 83.2 7.42e-17   NR MEZ4864036.1 2614250 g11102 i0 81.1 4.76047904191617 53 10 95.2 0 165 7 3079 3131 MEZ4864036.1 SdrD B-like domain-containing protein [Caldilineaceae bacterium] diamond 795 83.2 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30675192 30675192 PRJNA380416_P_NODE_12293_length_165_cov_0.879310_g12146_i0 PRJNA380416 12293 165 0.87931 1.4508615 Chloroflexota bacterium 2026724 Bacteria Bacteria 94 1.14e-20   NR NPA30405.1 2026724 g12146 i0 83.3 41.2363636363636 54 9 98.2 0 2 163 239 292 NPA30405.1 ATP-dependent zinc metalloprotease FtsH [Chloroflexota bacterium] diamond 6804 94 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;