RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA380416", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5505668 5505668 PRJNA380416_P_NODE_12685_length_164_cov_0.886957_g12538_i0 PRJNA380416 12685 164 0.886957 1.45460948 Cryptosporidium meleagridis 93969 SAR_Eukaryotes SAR_Eukaryotes 69.3 1.82e-13   NR KAK9171502.1 93969 g12538 i0 71.7 2.61585365853659 46 13 84.1 0 15 152 70 115 KAK9171502.1 60S ribosomal protein L22 [Cryptosporidium meleagridis] diamond 429 69.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis
27169594 27169594 PRJNA380416_P_NODE_14102_length_161_cov_0.857143_g13955_i0 PRJNA380416 14102 161 0.857143 1.38000023 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 48.9 7.58e-5   NR XP_028870139.1 462227 g13955 i0 51.3 1.24844720496894 39 19 72.7 0 8 124 239 277 XP_028870139.1 putative diphthine methyl ester synthase [Babesia sp. Xinjiang] diamond 201 48.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;